Gene EcHS_A1012 details

Gene Information

• Locus tag: EcHS_A1012
• ID: 5592484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1017105
• End bp: 1017797
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640920181
• Product: hypothetical protein
• Protein accession: YP_001457746
• Protein GI: 157160428
• COG category: [S] Function unknown
• COG ID: [COG2323] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.0000212287
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGCGT TCGATCTCCA CCGTATGGCA TTTGATAAAG TGCCTTTTGA TTTCCTTGGC 
GAAGTTGCAC TACGTAGTCT TTATACCTTT GTACTGGTCT TTTTGTTCCT CAAAATGACC 
GGAAGACGCG GTGTGCGGCA GATGTCGCTG TTTGAAGTTT TAATCATTCT GACGCTGGGA 
TCAGCGGCGG GAGATGTGGC GTTTTATGAT GATGTGCCGA TGGTCCCGGT ACTTATCGTC 
TTTATTACTC TGGCGTTGTT ATACCGCCTG GTAATGTGGT TGATGGCGCA CAGTGAAAAA 
CTGGAAGATC TTCTGGAAGG CAAGCCAGTT GTCATTATTG AAGATGGCGA GCTGGCCTGG 
TCGAAACTCA ATAACTCCAA CATGACGGAA TTTGAGTTCT TTATGGAGCT ACGATTGCGT 
GGCGTGGAGC AGCTGGGGCA GGTACGTCTG GCGATTCTCG AAACCAACGG GCAAATCAGT 
GTCTATTTCT TTGAAGATGA CAAGGTGAAA CCGGGTTTAC TTATTTTACC CAGTGATTGT 
ACGCAGCGTT ACAAAGTGGT GCCGGAGTCG GCGGACTATG CCTGTATTCG TTGTAGTGAA 
ATCATTCATA TGAAAGCGGG GGAAAAACAA TTATGTCCGC GCTGTGCAAA TCCAGAATGG 
ACGAAGGCAA GTCGGGCAAA ACGGGTGACC TGA 

 

Protein sequence

MKAFDLHRMA FDKVPFDFLG EVALRSLYTF VLVFLFLKMT GRRGVRQMSL FEVLIILTLG 
SAAGDVAFYD DVPMVPVLIV FITLALLYRL VMWLMAHSEK LEDLLEGKPV VIIEDGELAW 
SKLNNSNMTE FEFFMELRLR GVEQLGQVRL AILETNGQIS VYFFEDDKVK PGLLILPSDC 
TQRYKVVPES ADYACIRCSE IIHMKAGEKQ LCPRCANPEW TKASRAKRVT