Gene EcHS_A1000 details

Gene Information

• Locus tag: EcHS_A1000
• Symbol: dmsB2
• ID: 5594964
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1003758
• End bp: 1004375
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640920171
• Product: dimethylsulfoxide reductase, B subunit
• Protein accession: YP_001457736
• Protein GI: 157160418
• COG category: [C] Energy production and conversion
• COG ID: [COG0437] Fe-S-cluster-containing hydrogenase components 1
• TIGRFAM ID: [TIGR02951] DMSO reductase, iron-sulfur subunit

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACCC AGTATGGATT TTTTATTGAT TCCAGCCGTT GCACCGGTTG CAAAACCTGC 
GAGCTGGCCT GTAAAGACTA CAAAGATTTG ACGCCAGAAG TCAGCTTCCG CCGCATTTAT 
GAATATGCTG GCGGCGACTG GCAGGAAGAT AACGGTGTCT GGCACCAGAA CGTGTTTGCC 
TACTATCTGT CGATTTCATG TAACCACTGC GAAGATCCGG CTTGTACTAA AGTCTGCCCG 
AGCGGTGCGA TGCATAAACG TGAAGATGGT TTTGTTGTGG TCGATGAAGA TGTGTGCATT 
GGCTGCCGCT ACTGCCATAT GGCTTGCCCG TATGGCGCAC CGCAATATAA CGAAACGAAA 
GGCCATATGA CCAAATGCGA TGGTTGTTAT GACCGTGTTG CGGAGGGTAA AAAGCCGATC 
TGTGTTGAAT CTTGTCCGCT GCGGGCGCTG GATTTCGGCC CTATCGACGA GCTGCGTAAA 
AAACATGGCG ATCTGGCGGC CGTTGCGCCG TTGCCGCGAG CTCACTTTAC CAAACCGAAT 
ATTGTGATCA AACCCAATGC CAATAGCCGC CCGACCGGGG ATACCACTGG CTATCTGGCA 
AACCCGAAGG AGGTGTGA 

 

Protein sequence

MTTQYGFFID SSRCTGCKTC ELACKDYKDL TPEVSFRRIY EYAGGDWQED NGVWHQNVFA 
YYLSISCNHC EDPACTKVCP SGAMHKREDG FVVVDEDVCI GCRYCHMACP YGAPQYNETK 
GHMTKCDGCY DRVAEGKKPI CVESCPLRAL DFGPIDELRK KHGDLAAVAP LPRAHFTKPN 
IVIKPNANSR PTGDTTGYLA NPKEV