Gene EcHS_A0996 details

Gene Information

• Locus tag: EcHS_A0996
• Symbol: lolA
• ID: 5592791
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 997716
• End bp: 998327
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640920167
• Product: outer-membrane lipoprotein carrier protein
• Protein accession: YP_001457732
• Protein GI: 157160414
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2834] Outer membrane lipoprotein-sorting protein
• TIGRFAM ID: [TIGR00547] periplasmic chaperone LolA

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 0.00638939
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TTGCCATCAC CTGTGCATTA CTCTCAAGCT TAGTAGCAAG CAGCGTTTGG 
GCTGATGCCG CAAGCGATCT GAAAAGCCGC CTGGATAAAG TCAGCAGCTT CCACGCCAGC 
TTCACACAAA AAGTGACTGA CGGTAGCGGC GCGGCGGTGC AGGAAGGTCA GGGCGATCTG 
TGGGTGAAAC GTCCAAACTT ATTCAACTGG CATATGACAC AACCTGATGA AAGCATTCTG 
GTTTCTGACG GTAAAACACT GTGGTTCTAT AACCCGTTCG TTGAGCAAGC TACGGCAACC 
TGGCTGAAAG ATGCCACCGG TAATACGCCG TTTATGCTGA TTGCCCGCAA CCAGTCCAGC 
GACTGGCAGC AGTACAATAT CAAACAGAAT GGCGATGACT TTGTCCTGAC GCCGAAAGCC 
AGCAATGGCA ATCTGAAGCA GTTCACCATT AACGTGGGAC GTGATGGCAC AATCCATCAG 
TTTAGCGCGG TGGAGCAGGA CGATCAGCGC AGCAGTTATC AACTGAAATC CCAGCAAAAT 
GGGGCTGTGG ATGCAGCGAA ATTTACCTTC ACCCCGCCGC AAGGCGTCAC GGTAGATGAT 
CAACGTAAGT AG 

 

Protein sequence

MKKIAITCAL LSSLVASSVW ADAASDLKSR LDKVSSFHAS FTQKVTDGSG AAVQEGQGDL 
WVKRPNLFNW HMTQPDESIL VSDGKTLWFY NPFVEQATAT WLKDATGNTP FMLIARNQSS 
DWQQYNIKQN GDDFVLTPKA SNGNLKQFTI NVGRDGTIHQ FSAVEQDDQR SSYQLKSQQN 
GAVDAAKFTF TPPQGVTVDD QRK