Gene EcHS_A0990 details

Gene Information

• Locus tag: EcHS_A0990
• Symbol: cudC
• ID: 5592884
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 987822
• End bp: 989543
• Gene Length: 1722 bp
• Protein Length: 573 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640920161
• Product: cysteine/glutathione ABC transporter membrane/ATP-binding component
• Protein accession: YP_001457726
• Protein GI: 157160408
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components
• TIGRFAM ID: [TIGR02868] thiol reductant ABC exporter, CydC subunit

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.034293
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGCTT TGCTACCCTA TCTGGCACTG TATAAACGTC ATAAATGGAT GTTAAGTCTT 
GGTATTGTGC TGGCAATTGT GACGCTGCTC GCCAGTATCG GTCTGTTGAC ACTTTCCGGC 
TGGTTCCTCT CGGCCTCAGC GGTTGCGGGG GTTGCCGGAC TGTACAGCTT CAACTATATG 
CTACCCGCTG CGGGCGTGCG TGGCGCAGCA ATCACCCGTA CTGCCGGGCG CTATTTTGAA 
CGTCTGGTAA GTCACGACGC GACTTTCCGC GTGTTGCAGC ATCTGCGCAT TTACACCTTC 
AGCAAATTGC TGCCCCTCTC CCCTGCCGGA CTGGCGCGCT ATCGTCAGGG CGAATTGCTC 
AATCGCGTGG TGGCGGATGT TGATACGCTC GATCATCTTT ACCTGCGCGT TATCTCGCCG 
CTGGTGGGCG CTTTTGTGGT GATTATGGTG GTGACAATCG GGTTAAGTTT CCTTGATTTC 
ACCCTCGCCT TTACGCTGGG CGGCATTATG TTACTGACGC TTTTCCTGAT GCCACCGCTG 
TTTTATCGTG CGGGAAAAAG CACCGGGCAA AATCTGACTC ATCTTCGCGG ACAGTATCGC 
CAACAACTGA CGGCCTGGCT GCAAGGGCAA GCTGAGCTGA CCATTTTTGG TGCCAGCGAT 
CGTTATCGCA CGCAACTAGA GAATACAGAA ATTCAATGGC TGGAAGCGCA ACGCCGTCAA 
TCTGAACTGA CCGCATTGTC GCAAGCGATA ATGCTGCTCA TTGGCGCGTT AGCGGTGATC 
CTGATGCTGT GGATGGCGTC TGGCGGCGTT GGCGGCAATG CTCAACCCGG CGCGTTAATT 
GCCCTGTTTG TCTTCTGCGC GTTAGCCGCG TTTGAAGCAC TGGCACCAGT AACGGGTGCA 
TTTCAGCATC TGGGGCAAGT CATTGCCTCT GCCGTTCGGA TCACTGATTT AACGGATCAA 
AAACCGGAAG TCACCTTCCC TGATACCCAA ACTCGTGTTG CCGATCGCGT TTCGCTGACA 
TTACGGGATG TTCAGTTCAC TTATCCGGAG CAATCCCAAC AGGCACTTAA AGGGATTTCT 
CTTCAGGTAA ACGCCGGGGA ACATATTGCG ATTCTCGGGC GAACCGGATG CGGCAAATCA 
ACACTGTTAC AACTGCTGAC CCACGCTTGG GACCCGCAAC AGGGCGAGAT TTTGCTTAAC 
GATAGCCCCA TAGCCAGCCT GAATGAAGCG TCTCTACGAC AGACCATCAG CGTTGTTCCT 
CAGCGAGTGC ATCTGTTTAG CGCCACGCTG CGTGATAATC TGTTACTCGC CTCGCCTGGC 
AGTAGTGATG AGGCTCTGTC GGAGATCTTG CGTCGCGTTG GTCTGGAGAA GCTGCTCGAG 
GATGCAGGTC TCAACAGTTG GTTAGGTGAA GGCGGACGCC AGCTCTCCGG TGGTGAACTG 
CGCCGTCTGG CTATCGCCCG TGCGCTGTTA CATGATGCGC CACTGGTGTT GCTGGATGAA 
CCTACCGAAG GCTTAGATGC CACAACCGAA AGCCAGATCC TTGAATTGCT TGCAGAAATG 
ATGCGTGAGA AAACGGTGTT AATGGTCACC CATCGACTTC GCGGACTCTC TCGTTTCCAA 
CAAATAATAG TGATGGACAA CGGGCAAATT ATTGAGCAAG GTACTCACGC AGAACTGCTT 
GCCAGACAGG GGCGTTATTA CCAGTTCAAG CAGGGTTTGT AA 

 

Protein sequence

MRALLPYLAL YKRHKWMLSL GIVLAIVTLL ASIGLLTLSG WFLSASAVAG VAGLYSFNYM 
LPAAGVRGAA ITRTAGRYFE RLVSHDATFR VLQHLRIYTF SKLLPLSPAG LARYRQGELL 
NRVVADVDTL DHLYLRVISP LVGAFVVIMV VTIGLSFLDF TLAFTLGGIM LLTLFLMPPL 
FYRAGKSTGQ NLTHLRGQYR QQLTAWLQGQ AELTIFGASD RYRTQLENTE IQWLEAQRRQ 
SELTALSQAI MLLIGALAVI LMLWMASGGV GGNAQPGALI ALFVFCALAA FEALAPVTGA 
FQHLGQVIAS AVRITDLTDQ KPEVTFPDTQ TRVADRVSLT LRDVQFTYPE QSQQALKGIS 
LQVNAGEHIA ILGRTGCGKS TLLQLLTHAW DPQQGEILLN DSPIASLNEA SLRQTISVVP 
QRVHLFSATL RDNLLLASPG SSDEALSEIL RRVGLEKLLE DAGLNSWLGE GGRQLSGGEL 
RRLAIARALL HDAPLVLLDE PTEGLDATTE SQILELLAEM MREKTVLMVT HRLRGLSRFQ 
QIIVMDNGQI IEQGTHAELL ARQGRYYQFK QGL