Gene EcHS_A0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0938 
Symbol 
ID5593557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp937278 
End bp938186 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content58% 
IMG OID640920108 
Productbaseplate assembly protein J 
Protein accessionYP_001457675 
Protein GI157160357 
COG category[R] General function prediction only 
COG ID[COG3948] Phage-related baseplate assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones86 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTGA TTGACCTTTC GCAGTTGCCT GCACCGCAGA TTGTGGATGT GCCGGACTTT 
GAGACGCTGC TTGCCGAACG CAAGGCAGAA TTTGTGGCGC TTCATCCGAA AGATGAGCAG
GAAGCCATGA TCCGCACGCT GGAACTGGAA TCTGAACCCG TCACTAAATT GTTGCAGGAG
AACGCTTACC GTGAGTTGCT TCTGCGCCAG CGCATTAACG AAGCCGCGCA GGCGGTGATG
GTGGCTTACG CGATGGGCGG CGATCTTGAC CAGCTCGCTG CCAACTACAA CGTGACACGC
CTGACGGTGA CGCCTGCTGA TAATGATGCT GTGCCGCCCG TTGCAGCTGT GATGGAAAGC
GATGAAGCGT TACGCCTGCG TGTGCCTGCA GCCTTTGAAG GGCTTTCTGT TGCGGGGCCA
ACTGCAGCTT ATGAATTTCA TGCCCGAAGC GCCGACGGTC GGGTGGCGGA TGCCAGTGCA
ACCAGCCCGG CACCTGCAGA GGTGGTGCTG ACTGTCCTTA GCCGCGAAGG CGATGGAACT
GCAGAAAAAG ACCTGCTGGA CGTGGTGGAA AAAGCTCTGA ACAGTGAGAA CGTCCGCCCG
GTGGCTGACC GTCTGACGGT TCGCAGCGCA GAAATCATCC CGTATCGCGT GGAAGCCACC
ATTTTTCTCT ATCCGGGACC GGAAGCAGAG CCGGTAATGG CAGCGGCAAA AGCCAGCCTG
CAGAAGTACA TCGCCAGTCA GACGCGTCTT GGTCGGGATA TTCGCCGTAG CGCCATCTTT
GCCGCCCTGC ATGTTGAGGG TGTGCAGCGT GTGGAGCTGG CTTCTCCTCT GGCGGATGTG
GTCCTGAACA AAACACAGGC GGCATCATGT ACGCAGTGGA GCGTAACCAA CGGAGGAACG
GATGAATAG
 
Protein sequence
MAVIDLSQLP APQIVDVPDF ETLLAERKAE FVALHPKDEQ EAMIRTLELE SEPVTKLLQE 
NAYRELLLRQ RINEAAQAVM VAYAMGGDLD QLAANYNVTR LTVTPADNDA VPPVAAVMES
DEALRLRVPA AFEGLSVAGP TAAYEFHARS ADGRVADASA TSPAPAEVVL TVLSREGDGT
AEKDLLDVVE KALNSENVRP VADRLTVRSA EIIPYRVEAT IFLYPGPEAE PVMAAAKASL
QKYIASQTRL GRDIRRSAIF AALHVEGVQR VELASPLADV VLNKTQAASC TQWSVTNGGT
DE