Gene EcHS_A0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0907 
Symbol 
ID5594188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp914967 
End bp916175 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content55% 
IMG OID640920077 
Productmajor facilitator transporter 
Protein accessionYP_001457644 
Protein GI157160326 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.379242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTAA ATTCTTCACG TAATGCATTG AAACGCCGAA CCTGGGCGCT GTTTATGTTC 
TTCTTTTTGC CAGGCCTGTT AATGGCGTCC TGGGCAACCC GTACGCCTGC TATCCGCGAT
ATTCTCTCTG TCTCGATCGC TGAAATGGGC GGTGTTCTCT TTGGTCTGTC GATCGGTTCG
ATGAGCGGTA TTCTCTGCTC GGCGTGGTTA GTGAAACGCT TTGGGACACG TAATGTCATC
CTGGTCACGA TGTCCTGCGC ATTGATCGGG ATGATGATAT TAAGTCTGGC ACTCTGGCTG
ACATCGCCCC TGCTCTTTGC CGTTGGTCTC GGCGTCTTTG GGGCAAGTTT TGGTTCTGCG
GAAGTGGCGA TAAACGTTGA AGGTGCCGCC GTTGAGCGAG AAATGAATAA AACGGTTTTG
CCGATGATGC ACGGTTTTTA TAGCCTGGGC ACGCTGGCAG GCGCTGGTGT CGGGATGGCA
CTGACGGCCT TTGGCGTTCC GGCAACGGTG CACATTTTAT TGGCGGCGCT GGTAGGTATC
GCGCCTATTT ATATCGCCAT TCAGGCAATC CCTGACGGTA CGGGCAAAAA TGCTGCCGAT
GGCACCCAGC ATGGCGAAAA AGGCGTACCT TTTTATCGCG ATATCCAGTT GCTGCTGATT
GGTGTTGTGG TGCTGGCGAT GGCCTTTGCC GAAGGTTCTG CCAACGACTG GTTACCCTTA
TTAATGGTTG ACGGTCACGG TTTTAGCCCC ACTTCCGGCT CGCTGATTTA TGCCGGTTTT
ACCCTGGGGA TGACCGTTGG ACGCTTCACT GGCGGTTGGT TCATCGACCG TTACAGTCGC
GTTGCCGTGG TTCGGGCCAG TGCGCTAATG GGGGCGTTGG GTATTGGGCT GATTATTTTT
GTCGATAGCG CCTGGGTCGC TGGGGTGTCT GTTGTACTCT GGGGAATGGG TGCCTCGCTG
GGCTTCCCGC TGACCATTTC TGCCGCCAGC GATACCGGCC CCGATGCACC AACCCGCGTC
AGTGTGGTAG CAACGACCGG TTATCTGGCT TTCCTCGTCG GGCCGCCGCT GCTGGGCTAT
CTCGGCGAAC ATTATGGATT ACGTAGTGCA ATGCTGGTTG TACTGGCGCT GGTTATTCTC
GCGGCTATTG TCGCGAAAGC CGTCGCCAAA CCCGATACCA AAACGCAGAC GGCGATGGAG
AATAGTTGA
 
Protein sequence
MTVNSSRNAL KRRTWALFMF FFLPGLLMAS WATRTPAIRD ILSVSIAEMG GVLFGLSIGS 
MSGILCSAWL VKRFGTRNVI LVTMSCALIG MMILSLALWL TSPLLFAVGL GVFGASFGSA
EVAINVEGAA VEREMNKTVL PMMHGFYSLG TLAGAGVGMA LTAFGVPATV HILLAALVGI
APIYIAIQAI PDGTGKNAAD GTQHGEKGVP FYRDIQLLLI GVVVLAMAFA EGSANDWLPL
LMVDGHGFSP TSGSLIYAGF TLGMTVGRFT GGWFIDRYSR VAVVRASALM GALGIGLIIF
VDSAWVAGVS VVLWGMGASL GFPLTISAAS DTGPDAPTRV SVVATTGYLA FLVGPPLLGY
LGEHYGLRSA MLVVLALVIL AAIVAKAVAK PDTKTQTAME NS