| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0881 |
|---|
| Symbol | |
|---|
| ID | 5594761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 888056 |
|---|
| End bp | 890488 |
|---|
| Gene Length | 2433 bp |
|---|
| Protein Length | 810 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640920053 |
|---|
| Product | formate C-acetyltransferas |
|---|
| Protein accession | YP_001457620 |
|---|
| Protein GI | 157160302 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1882] Pyruvate-formate lyase |
|---|
| TIGRFAM ID | [TIGR01774] pyruvate formate-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC TGAAACTGGA CACGCTCAGC GACCGCATTA AAGCGCACAA AAATGCGCTG
GTGCATATTG TGAAACCGCC AGTCTGTACC GAGCGCGCGC AGCACTATAC CGAGATGTAT
CAACAACATC TCGATAAGCC GATCCCGGTA CGTCGCGCGC TGGCACTGGC GCATCACCTG
GCGAATCGCA CTATCTGGAT CAAGCACGAT GAGTTGATCA TTGGCAACCA GGCAAGCGAA
GTTCGCGCCG CGCCGATCTT CCCGGAATAT ACCGTCTCCT GGATCGAAAA AGAGATTGAT
GATCTGGCAG ATCGTCCGGG TGCTGGTTTT GCGGTGAGCG AAGAGAACAA ACGTGTTCTG
CATGAAGTGT GCCCTTGGTG GCGCGGTCAG ACGGTACAGG ATCGTTGCTA CGGCATGTTT
ACCGATGAGC AAAAAGGTCT GCTGGCGACC GGAATCATTA AAGCGGAGGG CAATATGACT
TCCGGCGATG CGCACCTGGC GGTCAATTTC CCGCTGCTGC TGGAAAAAGG GCTTGATGGT
CTGCGCGAGA AAGTGGCGGA ACGTCGCTCG CGCATCAACC TGACGGTGCT GGAAGATTTG
CACGGCGAGC AGTTCCTGAA AGCGATTGAT ATCGTGCTGG TGGCAGTCAG TGAACACATT
GAACGTTTCG CTGCCCTGGC GCGTGAAATG GCCGCGACCG AAACCCGCGA AAGCCGTCGC
GATGAACTGC TGGCGATAGC AGAAAACTGC GATCTTATCG CCCACCAGCC GCCGCAGACG
TTCTGGCAGG CGCTGCAACT GTGCTACTTC ATCCAGTTGA TTTTGCAGAT TGAATCTAAC
GGTCACTCGG TGTCGTTTGG TCGTATGGAC CAGTATCTCT ACCCGTATTA TCGCCGTGAT
GTTGAACTGA ACCAAATGCT GGAACGCGAA CACGCCATCG AATTGCTGCA TAGCTGCTGG
TTGAAATTGC TGGAAGTGAA CAAGATCCGC TCCGGCTCAC ACTCAAAAGC CTCTGCGGGT
AGCCCGCTGT ATCAGAACGT CACCATTGGC GGGCAAAATT TGATTGATGG TCAGCCGATG
GATGCGGTGA ATCCGCTCTC CTACGCGATC CTCGAATCCT GCGGTCGCCT GCGTTCGACG
CAGCCTAACC TCAGCGTGCG CTACCATGCG GGAATGAGTA ACGATTTCCT CGACGCCTGC
GTACAGGTGA TCCGGTGCGG CTTCGGGATG CCGGCCTTCA ACAACGACGA AATCGTGATC
CCGGAATTTA TTAAACTCGG TATTGAACCG CAGGACGCTT ACGACTACGC AGCGATTGGT
TGTATCGAAA CCGCCGTCGG TGGCAAATGG GGCTATCGCT GTACCGGCAT GAGCTTTATC
AACTTCGCCC GCGTGATGCT GGCTGCGCTG GAAGGCGGTC GTGATGCCAC CAGCGGCAAA
GTGTTCCTGG CACAAGAAAA AGCGTTGTCG GCAGGTAACT TCAACAACTT CGATGAAGTA
ATGGACGCGT GGGATACGCA AATCCGTTAC TACACCCGCA AATCAATCGA AATCGAATAT
GTCGTCGACA CCATGCTGGA AGAGAACGTG CACGATATTC TCTGCTCGGC GCTGGTGGAT
GACTGTATTG AGCGAGCAAA AAGTATCAAG CAAGGCGGCG CGAAATATGA CTGGGTTTCT
GGCCTGCAGG TCGGCATTGC CAACCTCGGC AACAGCCTGG CGGCAGTGAA GAAACTGGTG
TTTGAACAGG GCGCGATTGG TCAGCAACAG CTGGCTGCCG CACTGGCGGA TGACTTCGAC
GGCCTGACTC ATGAGCAACT GCGTCAGCGG CTGATTAACG GTGCGCCGAA GTACGGTAAC
GACGATGATA CTGTCGATAC GCTGCTGGCT CGCGCTTATC AGACCTATAT CGACGAACTG
AAACAGTACC ATAATCCGCG CTACGGTCGT GGTCCGGTTG GCGGCAACTA TTACGCGGGT
ACGTCGTCTA TCTCCGCTAA CGTACCGTTT GGCGCGCAGA CGATGGCAAC GCCGGACGGA
CGTAAAGCGC ATACCCCGCT GGCAGAAGGC GCAAGCCCGG CTTCCGGTAC TGACCATCTC
GGCCCAACGG CAGTCATTGG ATCGGTGGGT AAACTGCCTA CAGCAGCGAT TCTCGGCGGC
GTGTTGCTCA ACCAGAAACT GAATCCGGCG ACGCTGGAGA ACGAATCTGA CAAGCAGAAA
CTGATGATCC TGCTCCGTAC CTTCTTCGAG GTGCATAAAG GCTGGCATAT TCAGTACAAC
ATCGTTTCCC GCGAAACGCT GCTGGAGGCG AAAAAACATC CCGATCAGTA TCGCGATCTG
GTAGTGCGTG TCGCGGGCTA TTCCGCCTTC TTCACCGCGC TCTCTCCAGA CGCTCAGGAC
GATATCATCG CCCGTACTGA ACATATGCTG TAA
|
|---|
| Protein sequence | MTTLKLDTLS DRIKAHKNAL VHIVKPPVCT ERAQHYTEMY QQHLDKPIPV RRALALAHHL
ANRTIWIKHD ELIIGNQASE VRAAPIFPEY TVSWIEKEID DLADRPGAGF AVSEENKRVL
HEVCPWWRGQ TVQDRCYGMF TDEQKGLLAT GIIKAEGNMT SGDAHLAVNF PLLLEKGLDG
LREKVAERRS RINLTVLEDL HGEQFLKAID IVLVAVSEHI ERFAALAREM AATETRESRR
DELLAIAENC DLIAHQPPQT FWQALQLCYF IQLILQIESN GHSVSFGRMD QYLYPYYRRD
VELNQMLERE HAIELLHSCW LKLLEVNKIR SGSHSKASAG SPLYQNVTIG GQNLIDGQPM
DAVNPLSYAI LESCGRLRST QPNLSVRYHA GMSNDFLDAC VQVIRCGFGM PAFNNDEIVI
PEFIKLGIEP QDAYDYAAIG CIETAVGGKW GYRCTGMSFI NFARVMLAAL EGGRDATSGK
VFLAQEKALS AGNFNNFDEV MDAWDTQIRY YTRKSIEIEY VVDTMLEENV HDILCSALVD
DCIERAKSIK QGGAKYDWVS GLQVGIANLG NSLAAVKKLV FEQGAIGQQQ LAAALADDFD
GLTHEQLRQR LINGAPKYGN DDDTVDTLLA RAYQTYIDEL KQYHNPRYGR GPVGGNYYAG
TSSISANVPF GAQTMATPDG RKAHTPLAEG ASPASGTDHL GPTAVIGSVG KLPTAAILGG
VLLNQKLNPA TLENESDKQK LMILLRTFFE VHKGWHIQYN IVSRETLLEA KKHPDQYRDL
VVRVAGYSAF FTALSPDAQD DIIARTEHML
|
|---|
| |