Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0863 |
Symbol | |
ID | 5594260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 869859 |
End bp | 872084 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640920035 |
Product | hypothetical protein |
Protein accession | YP_001457602 |
Protein GI | 157160284 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.00697122 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGTGGA TCCTGTTCAT CCTCTTCTGC CTGCTGGGCG CACCTGCCCA CGCGGTATCC ATACCCGGCG TTACAACCAC AACGACAACG GACTCAACGA CTGAACCGGC CCCGGAACCG GATATCGAAC AAAAAAAAGC GGCCTATGGC GCACTGGCGG ATGTGCTGGA TAATGACACC TCGCGTAAAG AGTTGATCGA CCAGTTGCGC ACCGTTGCCG CTACGCCCCC TGCTGAACCG GTACCAAAAA TAGTGCCGCC GACGCTGGTC GAAGAGCAAA CCGTGCTGCA AAAGGTCACC GAAGTCAGCC GCCATTATGG TGAAGCCCTT TCCGCCCGCT TCGGGCAACT TTATCGCAAT ATCACCGGCT CCCCGCATAA GCCGTTTAAT CCACAAACCT TCAGCAATGC GCTGACCCAT TTTTCAATGT TAGCGGTATT AGTGTTTGGT TTTTACTGGC TGATTCGCCT GTGCGCACTG CCGCTGTATC GCAAAATGGG TCAGTGGGCG CGGCAAAAAA ATCGTGAGCG CAGCAACTGG TTGCAGCTTC CGGCGATGAT TATCGGGGCG TTTATTATCG ACCTGCTGTT ACTGGCCCTG ACATTATTTG TCGGCCAGGT ATTAAGCGAC AACCTGAATG CAGGCAGTCG CACCATCGCT TTCCAACAAA GTTTGTTTCT CAACGCCTTT GCCCTCATTG AATTTTTCAA AGCCGTACTA CGCCTGATTT TTTGCCCAAA CGTGGCGGAG CTGCGCCCGT TCACGATTCA GGACGAGAGC GCCCGTTACT GGAGTCGTCG CCTGAGCTGG TTAAGCAGTT TGATAGGTTA TGGCCTGATT GTGGCCGTGC CGATTATCTC TAATCAGGTG AATGTACAGA TAGGTGCGCT GGCGAACGTC ATCATTATGC TGTGCATGAC CGTCTGGGCG TTGTACCTGA TCTTTCGTAA TAAAAAAGAG ATTACCCAGC ATTTGCTCAA CTTCGCGGAG CATTCGCTGG CCTTTTTCAG CCTGTTTATC CGCGCCTTTG CGCTGGTGTG GCACTGGCTG GCAAGCGCCT ATTTTATCGT GCTGTTTTTC TTTTCGTTGT TCGATCCGGG CAACAGCCTG AAATTTATGA TGGGTGCAAC GGTGCGCAGC CTGGCGATTA TTGGTATCGC AGCGTTTGTT TCCGGTATGT TTTCCCGCTG GCTGGCGAAA ACCATCACTC TCTCGCCACA TACTCAGCGT AACTATCCGG AGCTGCAAAA ACGGTTGAAT GGCTGGCTGT CGGCGGCGCT GAAAACGGCG CGTATTCTGA CAGTCTGCGT GGCGGTAATG TTGCTGTTGA GCGCATGGGG ATTGTTCGAT TTCTGGAACT GGCTGCAAAA CGGCGCGGGG CAGAAAACCG TAGATATCCT GATCCGTATC GCACTCATTC TTTTCTTCTC GGCGGTTGGC TGGACGGTGC TCGCCAGTTT GTTCGAAAAC CGGCTGGCTT CGGATATTCA TGGCCGCCCG CTACCCAGCG CCCGCACGCG TACCCTGCTT ACGCTGTTTC GTAACGCGCT GGCGGTGATT ATCAGTACCA TCACCATCAT GATTGTGTTG TCGGAAATCG GCGTCAATAT CGCGCCATTG CTGGCAGGTG CCGGGGCATT AGGTCTGGCT ATCTCGTTTG GTTCGCAAAC GCTGGTGAAA GATATTATCA CCGGGGTATT TATTCAGTTT GAAAACGGCA TGAACACTGG AGATTTGGTG ACTATCGGGC CGTTGACCGG CACAGTGGAA CGGATGTCGA TTCGCTCCGT GGGCGTACGC CAGGATACCG GGGCGTATCA CATCATTCCG TGGTCTTCGA TAACCACCTT TGCTAACTTT GTCCGCGGCA TTGGTTCGGT GGTGGCAAAT TATGATGTTG ATCGCCATGA AGATGCTGAT AAAGCCAATC AGGCACTGAA AGATGCGGTA GCGGAATTAA TGGAAAACGA AGAAATTCGC GGGCTGATTA TTGGTGAACC GAATTTTGCC GGGATTGTCG GCTTAAGCAA TACCGCGTTT ACACTGCGTG TTTCGTTCAC CACGCTGCCA CTCAAACAGT GGACGGTACG CTTTGCCCTC GACAGCCAGG TGAAAAAACA TTTCGACCTG GCGGGCGTTC GCGCGCCAGT GCAGACTTAT CAGGTGCTGC CTGCTCCGGG CGCGACCCCG GCTGAACCGT TACCGCCGGG GGAACCAACG CTTTAA
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Protein sequence | MRWILFILFC LLGAPAHAVS IPGVTTTTTT DSTTEPAPEP DIEQKKAAYG ALADVLDNDT SRKELIDQLR TVAATPPAEP VPKIVPPTLV EEQTVLQKVT EVSRHYGEAL SARFGQLYRN ITGSPHKPFN PQTFSNALTH FSMLAVLVFG FYWLIRLCAL PLYRKMGQWA RQKNRERSNW LQLPAMIIGA FIIDLLLLAL TLFVGQVLSD NLNAGSRTIA FQQSLFLNAF ALIEFFKAVL RLIFCPNVAE LRPFTIQDES ARYWSRRLSW LSSLIGYGLI VAVPIISNQV NVQIGALANV IIMLCMTVWA LYLIFRNKKE ITQHLLNFAE HSLAFFSLFI RAFALVWHWL ASAYFIVLFF FSLFDPGNSL KFMMGATVRS LAIIGIAAFV SGMFSRWLAK TITLSPHTQR NYPELQKRLN GWLSAALKTA RILTVCVAVM LLLSAWGLFD FWNWLQNGAG QKTVDILIRI ALILFFSAVG WTVLASLFEN RLASDIHGRP LPSARTRTLL TLFRNALAVI ISTITIMIVL SEIGVNIAPL LAGAGALGLA ISFGSQTLVK DIITGVFIQF ENGMNTGDLV TIGPLTGTVE RMSIRSVGVR QDTGAYHIIP WSSITTFANF VRGIGSVVAN YDVDRHEDAD KANQALKDAV AELMENEEIR GLIIGEPNFA GIVGLSNTAF TLRVSFTTLP LKQWTVRFAL DSQVKKHFDL AGVRAPVQTY QVLPAPGATP AEPLPPGEPT L
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