Gene EcHS_A0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0848 
Symbol 
ID5593334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp853849 
End bp855585 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content55% 
IMG OID640920020 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_001457587 
Protein GI157160269 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATG CCGTTATCAC GCTGAACGGC CTGGAAAAAC GCTTTCCGGG CATGGACAAG 
CCCGCCGTCG CGCCGCTCGA TTGTACCATT CACGCCGGTT ATGTGACGGG GTTGGTGGGG
CCGGACGGTG CAGGTAAAAC CACGCTGATG CGGATGTTGG CGGGATTACT GAAACCCGAC
AGCGGCAGTG CCACGGTGAT TGGCTTTGAT CCGATCAAAA ACGACGGCGC GCTGCACGCC
GTGCTCGGCT ATATGCCGCA GAAATTTGGT CTGTATGAAG ATCTCACGGT GATGGAGAAC
CTCAATCTGT ACGCGGATTT GCGCAGCGTC ACCGGCGAGG CACGTAAGCA AACTTTTGCT
CGCCTGCTGG AGTTTACGTC TCTTGGGCCG TTTACCGGAC GCCTGGCGGG CAAGCTCTCC
GGTGGGATGA AACAAAAACT CGGCCTGGCC TGTACCCTGG TGGGCGAACC GAAAGTGTTG
CTGCTCGATG AACCCGGCGT CGGCGTTGAC CCTATCTCAC GGCGCGAACT GTGGCAGATG
GTGCATGAGC TGGCGGGCGA AGGGATGTTA ATCCTCTGGA GTACCTCGTA TCTCGACGAA
GCCGAGCAGT GCCGTGACGT GTTACTGATG AACGAAGGCG AGTTGCTGTA TCAGGGAGAA
CCAAAAGCCC TGACACAAAC CATGGCCGGA CGCAGCTTTC TGATGACCAG TCCACACGAG
GGCAACCGCA AACTGTTGCA ACGCGCCTTG AAACTGCCGC AGGTCAGCGA CGGCATGATT
CAGGGGAAAT CGGTACGTCT GATCCTCAAA AAAGAGGCCA CACCAGACGA TATTCGCCAT
GCCGACGGGA TGCCGGAAAT CAACATCAAC GAAACTACGC CGCGTTTTGA AGATGCGTTT
ATTGATTTGC TGGGTGGTGC CGGAACCTCA GAATCGCCGC TGGGTGCAAT ATTGCATACG
GTAGAAGGCA CACCCGGCGA GACGGTGATC GAAGCGAAAG AACTGACCAA GAAATTTGGT
GATTTTGCCG CCACCGATCA CGTCAACTTT GCCGTTAAAC GTGGGGAGAT TTTTGGTTTG
CTGGGGCCAA ACGGCGCGGG TAAATCGACC ACCTTTAAGA TGATGTGCGG TTTGCTGGTG
CCGACTTCCG GCCAGGCGCT GGTGCTGGGG ATGGATCTGA AAGAGAGTTC CGGTAAAGCG
CGCCAGCATC TCGGCTATAT GGCGCAAAAA TTTTCGCTCT ACGGCAACCT GACGGTCGAA
CAGAATTTAC GCTTTTTCTC TGGTGTGTAT GGCTTACGCG GTCGGGCGCA GAACGAAAAA
ATCTCCCGTA TGAGCGAGGC ATTTGGCCTG AAAAGTATCG CCTCCCACGC GACCGATGAA
CTGCCATTAG GTTTTAAACA GCGGCTGGCG CTGGCCTGTT CGCTGATGCA TGAACCGGAC
ATTCTGTTTC TCGACGAACC AACGTCCGGC GTTGATCCCC TCACCCGCCG CGAATTTTGG
CTGCATATCA ACAGCATGGT AGAGAAAGGC GTCACGGTGA TGGTCACCAC TCACTTTATG
GATGAAGCAG AATATTGCGA CCGCATCGGC CTGGTGTACC GTGGGAAATT AATTGCCAGC
GGCACGCCGG ATGATTTGAA AGCGCAGTCG GCCAACGACG AGCAACCCGA TCCCACCATG
GAGCAAGCCT TTATTCAGTT GATCCACGAC TGGGATAAGG AGCATAGCAA TGAGTAA
 
Protein sequence
MNDAVITLNG LEKRFPGMDK PAVAPLDCTI HAGYVTGLVG PDGAGKTTLM RMLAGLLKPD 
SGSATVIGFD PIKNDGALHA VLGYMPQKFG LYEDLTVMEN LNLYADLRSV TGEARKQTFA
RLLEFTSLGP FTGRLAGKLS GGMKQKLGLA CTLVGEPKVL LLDEPGVGVD PISRRELWQM
VHELAGEGML ILWSTSYLDE AEQCRDVLLM NEGELLYQGE PKALTQTMAG RSFLMTSPHE
GNRKLLQRAL KLPQVSDGMI QGKSVRLILK KEATPDDIRH ADGMPEININ ETTPRFEDAF
IDLLGGAGTS ESPLGAILHT VEGTPGETVI EAKELTKKFG DFAATDHVNF AVKRGEIFGL
LGPNGAGKST TFKMMCGLLV PTSGQALVLG MDLKESSGKA RQHLGYMAQK FSLYGNLTVE
QNLRFFSGVY GLRGRAQNEK ISRMSEAFGL KSIASHATDE LPLGFKQRLA LACSLMHEPD
ILFLDEPTSG VDPLTRREFW LHINSMVEKG VTVMVTTHFM DEAEYCDRIG LVYRGKLIAS
GTPDDLKAQS ANDEQPDPTM EQAFIQLIHD WDKEHSNE