Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0848 |
Symbol | |
ID | 5593334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 853849 |
End bp | 855585 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640920020 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_001457587 |
Protein GI | 157160269 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGATG CCGTTATCAC GCTGAACGGC CTGGAAAAAC GCTTTCCGGG CATGGACAAG CCCGCCGTCG CGCCGCTCGA TTGTACCATT CACGCCGGTT ATGTGACGGG GTTGGTGGGG CCGGACGGTG CAGGTAAAAC CACGCTGATG CGGATGTTGG CGGGATTACT GAAACCCGAC AGCGGCAGTG CCACGGTGAT TGGCTTTGAT CCGATCAAAA ACGACGGCGC GCTGCACGCC GTGCTCGGCT ATATGCCGCA GAAATTTGGT CTGTATGAAG ATCTCACGGT GATGGAGAAC CTCAATCTGT ACGCGGATTT GCGCAGCGTC ACCGGCGAGG CACGTAAGCA AACTTTTGCT CGCCTGCTGG AGTTTACGTC TCTTGGGCCG TTTACCGGAC GCCTGGCGGG CAAGCTCTCC GGTGGGATGA AACAAAAACT CGGCCTGGCC TGTACCCTGG TGGGCGAACC GAAAGTGTTG CTGCTCGATG AACCCGGCGT CGGCGTTGAC CCTATCTCAC GGCGCGAACT GTGGCAGATG GTGCATGAGC TGGCGGGCGA AGGGATGTTA ATCCTCTGGA GTACCTCGTA TCTCGACGAA GCCGAGCAGT GCCGTGACGT GTTACTGATG AACGAAGGCG AGTTGCTGTA TCAGGGAGAA CCAAAAGCCC TGACACAAAC CATGGCCGGA CGCAGCTTTC TGATGACCAG TCCACACGAG GGCAACCGCA AACTGTTGCA ACGCGCCTTG AAACTGCCGC AGGTCAGCGA CGGCATGATT CAGGGGAAAT CGGTACGTCT GATCCTCAAA AAAGAGGCCA CACCAGACGA TATTCGCCAT GCCGACGGGA TGCCGGAAAT CAACATCAAC GAAACTACGC CGCGTTTTGA AGATGCGTTT ATTGATTTGC TGGGTGGTGC CGGAACCTCA GAATCGCCGC TGGGTGCAAT ATTGCATACG GTAGAAGGCA CACCCGGCGA GACGGTGATC GAAGCGAAAG AACTGACCAA GAAATTTGGT GATTTTGCCG CCACCGATCA CGTCAACTTT GCCGTTAAAC GTGGGGAGAT TTTTGGTTTG CTGGGGCCAA ACGGCGCGGG TAAATCGACC ACCTTTAAGA TGATGTGCGG TTTGCTGGTG CCGACTTCCG GCCAGGCGCT GGTGCTGGGG ATGGATCTGA AAGAGAGTTC CGGTAAAGCG CGCCAGCATC TCGGCTATAT GGCGCAAAAA TTTTCGCTCT ACGGCAACCT GACGGTCGAA CAGAATTTAC GCTTTTTCTC TGGTGTGTAT GGCTTACGCG GTCGGGCGCA GAACGAAAAA ATCTCCCGTA TGAGCGAGGC ATTTGGCCTG AAAAGTATCG CCTCCCACGC GACCGATGAA CTGCCATTAG GTTTTAAACA GCGGCTGGCG CTGGCCTGTT CGCTGATGCA TGAACCGGAC ATTCTGTTTC TCGACGAACC AACGTCCGGC GTTGATCCCC TCACCCGCCG CGAATTTTGG CTGCATATCA ACAGCATGGT AGAGAAAGGC GTCACGGTGA TGGTCACCAC TCACTTTATG GATGAAGCAG AATATTGCGA CCGCATCGGC CTGGTGTACC GTGGGAAATT AATTGCCAGC GGCACGCCGG ATGATTTGAA AGCGCAGTCG GCCAACGACG AGCAACCCGA TCCCACCATG GAGCAAGCCT TTATTCAGTT GATCCACGAC TGGGATAAGG AGCATAGCAA TGAGTAA
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Protein sequence | MNDAVITLNG LEKRFPGMDK PAVAPLDCTI HAGYVTGLVG PDGAGKTTLM RMLAGLLKPD SGSATVIGFD PIKNDGALHA VLGYMPQKFG LYEDLTVMEN LNLYADLRSV TGEARKQTFA RLLEFTSLGP FTGRLAGKLS GGMKQKLGLA CTLVGEPKVL LLDEPGVGVD PISRRELWQM VHELAGEGML ILWSTSYLDE AEQCRDVLLM NEGELLYQGE PKALTQTMAG RSFLMTSPHE GNRKLLQRAL KLPQVSDGMI QGKSVRLILK KEATPDDIRH ADGMPEININ ETTPRFEDAF IDLLGGAGTS ESPLGAILHT VEGTPGETVI EAKELTKKFG DFAATDHVNF AVKRGEIFGL LGPNGAGKST TFKMMCGLLV PTSGQALVLG MDLKESSGKA RQHLGYMAQK FSLYGNLTVE QNLRFFSGVY GLRGRAQNEK ISRMSEAFGL KSIASHATDE LPLGFKQRLA LACSLMHEPD ILFLDEPTSG VDPLTRREFW LHINSMVEKG VTVMVTTHFM DEAEYCDRIG LVYRGKLIAS GTPDDLKAQS ANDEQPDPTM EQAFIQLIHD WDKEHSNE
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