Gene EcHS_A0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0847 
Symbol 
ID5593523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp852723 
End bp853856 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content55% 
IMG OID640920019 
ProductABC-2 type transporter, permease protein 
Protein accessionYP_001457586 
Protein GI157160268 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACC CGATTCTGTC CTGGCGTCGC GTACGGGCGC TGTGCGTTAA AGAGACGCGG 
CAGATCGTTC GCGATCCGAG TAGCTGGCTG ATTGCGGTAG TGATCCCGCT GCTACTGCTG
TTTATTTTTG GTTACGGCAT TAACCTCGAC TCCAGCAAGC TGCGGGTCGG GATTTTACTG
GAACAGCGTA GCGAAGCGGC GCTGGATTTC ACCCACACCA TGACCGGTTC ACCCTACATC
GACGCCACCA TCAGCGATAA CCGTCAGGAA CTGATCGCCA AAATGCAGGC GGGGAAAATT
CGCGGTCTGG TGGTTATTCC GGTGGATTTT GCGGAACAGA TGGAGCGCGC CAACGCCACC
GCACCGATTC AGGTGATCAC CGACGGCAGT GAGCCGAATA CCGCTAACTT TGTACAGGGG
TATGTCGAAG GGATCTGGCA GATCTGGCAA ATGCAGCGAG CGGAGGACAA CGGGCAGACT
TTTGAACCGC TTATTGATGT ACAAACCCGC TACTGGTTTA ACCCGGCGGC GATAAGCCAG
CACTTTATTA TCCCGGGTGC GGTGACCATT ATCATGACGG TCATCGGCGC GATTCTCACC
TCGCTGGTGG TGGCGCGAGA ATGGGAACGC GGCACCATGG AGGCTCTGCT CTCTACGGAG
ATTACCCGCA CGGAACTGCT GCTGTGTAAG CTGATCCCTT ATTACTTTCT CGGGATGCTG
GCGATGCTGC TGTGTATGCT GGTGTCAGTG TTTATTCTCG GCGTGCCGTA TCGCGGTTCG
CTGCTTATTC TGTTTTTTAT CTCCAGCCTG TTTTTACTCA GTACCCTGGG GATGGGGCTG
CTGATTTCCA CGATTACCCG CAACCAGTTC AATGCCGCTC AGGTCGCCCT GAACGCCGCG
TTCCTGCCGT CGATTATGCT TTCCGGCTTT ATTTTTCAGA TCGACAGTAT GCCCGCGGTG
ATCCGCGCGG TGACGTACAT TATTCCCGCT CGTTATTTCG TCAGCACCCT GCAAAGCCTG
TTCCTCGCCG GGAATATTCC AGTGGTGCTG GTGGTAAACG TGCTGTTTTT GATCGCTTCG
GCGGTGATGT TTATCGGCCT GACGTGGCTG AAAACCAAAC GTCGGCTGGA TTAG
 
Protein sequence
MSNPILSWRR VRALCVKETR QIVRDPSSWL IAVVIPLLLL FIFGYGINLD SSKLRVGILL 
EQRSEAALDF THTMTGSPYI DATISDNRQE LIAKMQAGKI RGLVVIPVDF AEQMERANAT
APIQVITDGS EPNTANFVQG YVEGIWQIWQ MQRAEDNGQT FEPLIDVQTR YWFNPAAISQ
HFIIPGAVTI IMTVIGAILT SLVVAREWER GTMEALLSTE ITRTELLLCK LIPYYFLGML
AMLLCMLVSV FILGVPYRGS LLILFFISSL FLLSTLGMGL LISTITRNQF NAAQVALNAA
FLPSIMLSGF IFQIDSMPAV IRAVTYIIPA RYFVSTLQSL FLAGNIPVVL VVNVLFLIAS
AVMFIGLTWL KTKRRLD