Gene EcHS_A0846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0846 
Symbol 
ID5593522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp851606 
End bp852712 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content52% 
IMG OID640920018 
ProductABC-2 type transporter, permease protein 
Protein accessionYP_001457585 
Protein GI157160267 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCATC GCTTATGGAC GTTAATCCGC AAAGAGTTGC AGTCGTTGCT GCGCGAACCA 
CAAACCCGCG CGATTCTGAT TTTACCTGTG CTTATTCAGG TGATCCTGTT CCCGTTCGCC
GCCACGCTGG AAGTGACTAA CGCCACCATC GCCATCTACG ATGAAGATAA CGGCGAGCAT
TCGGTGGAGC TGACCCAACG TTTTGCCCGC GCCAGCGCCT TTACCCATGT GCTGCTGCTG
AAAAGCCCAC AGGAGATCCG CCCAACCATC GACACACAAA AGGCGTTACT ACTGGTGCGT
TTCCCGGCTG ACTTCTCGCG CAAACTGGAT ACCTTCCAGA CCGCGCCGTT GCAGTTGATC
CTCGACGGGC GTAACTCCAA CAGTGCGCAA ATTGCCGCCA ACTACCTGCA ACAGATCGTC
AAAAATTATC AGCAGGAGCT GCTGGAAGGA AAACCGAAAC CTAACAACAG CGAGCTGGTG
GTACGCAACT GGTATAACCC GAATCTTGAC TACAAATGGT TTGTGGTGCC GTCGCTGATC
GCCATGATCA CCACTATCGG CGTAATGATC GTCACTTCAC TTTCCGTCGC CCGCGAACGT
GAACAAGGTA CGCTCGATCA GCTACTGGTT TCGCCGCTCA CCACCTGGCA GATCTTCATC
GGCAAAGCCG TACCGGCGTT AATTGTCGCC ACCTTCCAGG CCACCATTGT GCTGGCGATT
GGTATCTGGG CGTATCAAAT CCCCTTCGCC GGATCGCTGG CGCTGTTCTA CTTTACGATG
GTGATTTACG GTTTATCGCT GGTGGGATTC GGTCTGTTGA TTTCATCACT CTGCTCGACA
CAACAGCAGG CGTTTATCGG CGTGTTTGTT TTTATGATGC CCGCCATTCT CCTTTCCGGT
TACGTTTCTC CGGTGGAAAA CATGCCAGTA TGGCTGCAAA ACCTGACGTG GATTAACCCT
ATTCGCCACT TTACGGACAT TACCAAGCAG ATTTATTTGA AGGATGCGAG TCTGGATATT
GTGTGGAATA GTTTGTGGCC GCTACTGGTG ATAACGGCCA CGACAGGGTC AGCGGCGTAC
GCGATGTTTA GACGTAAGGT GATGTAA
 
Protein sequence
MFHRLWTLIR KELQSLLREP QTRAILILPV LIQVILFPFA ATLEVTNATI AIYDEDNGEH 
SVELTQRFAR ASAFTHVLLL KSPQEIRPTI DTQKALLLVR FPADFSRKLD TFQTAPLQLI
LDGRNSNSAQ IAANYLQQIV KNYQQELLEG KPKPNNSELV VRNWYNPNLD YKWFVVPSLI
AMITTIGVMI VTSLSVARER EQGTLDQLLV SPLTTWQIFI GKAVPALIVA TFQATIVLAI
GIWAYQIPFA GSLALFYFTM VIYGLSLVGF GLLISSLCST QQQAFIGVFV FMMPAILLSG
YVSPVENMPV WLQNLTWINP IRHFTDITKQ IYLKDASLDI VWNSLWPLLV ITATTGSAAY
AMFRRKVM