Gene EcHS_A0771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0771 
SymbolsdhA 
ID5594371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp781992 
End bp783758 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content56% 
IMG OID640919947 
Productsuccinate dehydrogenase flavoprotein subunit 
Protein accessionYP_001457521 
Protein GI157160203 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGC CAGTCAGAGA ATTTGATGCA GTTGTGATTG GTGCCGGTGG CGCAGGTATG 
CGCGCGGCGC TGCAAATTTC CCAGAGCGGT CAAACCTGTG CGCTGCTCTC TAAAGTCTTC
CCGACCCGTT CCCATACCGT TTCTGCGCAA GGCGGCATTA CCGTTGCGCT GGGTAATACC
CATGAAGATA ACTGGGAATG GCATATGTAC GACACCGTAA AAGGTTCGGA CTATATCGGT
GACCAGGACG CGATTGAATA TATGTGTAAA ACCGGGCCGG AAGCGATTCT GGAACTCGAA
CACATGGGCC TGCCGTTCTC GCGTCTTGAT GATGGTCGTA TCTATCAACG TCCGTTTGGC
GGTCAGTCGA AAAACTTCGG CGGCGAGCAG GCGGCACGCA CTGCGGCAGC AGCTGACCGT
ACCGGTCACG CACTGTTGCA TACCCTTTAT CAGCAGAACC TGAAAAACCA CACCACTATT
TTCTCCGAGT GGTATGCGCT GGATCTGGTG AAAAACCAGG ATGGCGCGGT GGTGGGTTGT
ACTGCACTGT GCATCGAAAC TGGTGAAGTG GTTTATTTCA AAGCCCGCGC TACCGTGCTG
GCGACTGGCG GGGCAGGGCG TATTTATCAG TCCACCACTA ACGCCCACAT TAACACTGGC
GACGGCGTCG GCATGGCTAT CCGCGCAGGC GTACCGGTGC AGGATATGGA AATGTGGCAG
TTCCACCCGA CCGGTATTGC CGGTGCGGGC GTACTGGTCA CCGAAGGTTG CCGTGGTGAA
GGCGGTTATC TGCTGAACAA ACATGGCGAA CGCTTTATGG AGCGTTATGC GCCGAACGCC
AAAGACCTGG CGGGCCGTGA CGTGGTGGCG CGTTCCATCA TGATTGAAAT CCGTGAAGGT
CGCGGCTGTG ATGGTCCGTG GGGGCCACAT GCGAAACTGA AACTCGACCA CCTGGGTAAA
GAAGTTCTCG AATCCCGTCT GCCGGGTATT CTGGAACTCT CCCGTACCTT CGCTCACGTT
GATCCGGTGA AAGAGCCGAT TCCGGTTATC CCAACCTGTC ACTACATGAT GGGTGGTATT
CCGACCAAAG TGACCGGTCA GGCGCTGACG GTGAACGAGA AAGGCGAAGA TGTGGTTGTT
CCGGGGCTGT TTGCCGTTGG TGAAATCGCT TGTGTATCGG TACACGGCGC TAACCGTCTG
GGCGGCAACT CGCTGCTGGA CCTGGTGGTC TTTGGTCGCG CAGCGGGTCT GCATCTGCAA
GAGTCTATCG CCGAGCAGGG CGCATTGCGC GATGCCAGCG AGTCTGATGT TGAAGCATCT
CTGGATCGTC TGAACCGCTG GAACAATAAT CGTAACGGTG AAGATCCGGT GGCGATTCGT
AAAGCGCTGC AAGAATGTAT GCAGCATAAC TTCTCGGTCT TCCGTGAAGG TGATGCGATG
GCGAAAGGGC TTGAGCAGTT GAAAGTTATC CGCGAGCGTC TGAAAAATGC CCGTCTGGAT
GACACTTCCA GCGAGTTCAA CACCCAGCGC GTTGAGTGCC TGGAACTGGA TAACCTGATG
GAAACGGCGT ATGCAACGGC TGTTTCTGCC AACTTCCGTA CCGAAAGCCG TGGCGCGCAT
AGCCGCTTCG ACTTCCCGGA TCGTGATGAT GAAAACTGGC TGTGCCACTC CCTGTATCTG
CCAGAGTCGG AATCCATGAC GCGCCGAAGC GTCAACATGG AACCGAAACT GCGCCCGGCA
TTCCCGCCGA AGATTCGTAC TTACTAA
 
Protein sequence
MKLPVREFDA VVIGAGGAGM RAALQISQSG QTCALLSKVF PTRSHTVSAQ GGITVALGNT 
HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE HMGLPFSRLD DGRIYQRPFG
GQSKNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAVVGC
TALCIETGEV VYFKARATVL ATGGAGRIYQ STTNAHINTG DGVGMAIRAG VPVQDMEMWQ
FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG
RGCDGPWGPH AKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI
PTKVTGQALT VNEKGEDVVV PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGLHLQ
ESIAEQGALR DASESDVEAS LDRLNRWNNN RNGEDPVAIR KALQECMQHN FSVFREGDAM
AKGLEQLKVI RERLKNARLD DTSSEFNTQR VECLELDNLM ETAYATAVSA NFRTESRGAH
SRFDFPDRDD ENWLCHSLYL PESESMTRRS VNMEPKLRPA FPPKIRTY