Gene EcHS_A0769 details

Gene Information

• Locus tag: EcHS_A0769
• Symbol: sdhC
• ID: 5594369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 781247
• End bp: 781651
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640919945
• Product: succinate dehydrogenase cytochrome b556 large membrane subunit
• Protein accession: YP_001457519
• Protein GI: 157160201
• COG category: [C] Energy production and conversion
• COG ID: [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
• TIGRFAM ID: [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit

Plasmid Coverage information

• Num covering plasmid clones: 57
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGGCGT TATTCATGAT AAGAAATGTG AAAAAACAAA GACCTGTTAA TCTGGACCTA 
CAGACCATCC GGTTCCCCAT CACGGCGATA GCGTCCATTC TCCATCGCGT TTCCGGTGTG 
ATCACCTTTG TTGCAGTGGG CATCCTGCTG TGGCTTCTGG GTACCAGCCT CTCTTCCCCT 
GAAGGTTTCG AGCAAGCTTC CGCGATTATG GGCAGCTTCT TCGTCAAATT TATCATGTGG 
GGCATCCTTA CCGCTCTGGC GTATCACGTC GTCGTAGGTA TTCGCCACAT GATGATGGAT 
TTTGGCTATC TGGAAGAAAC ATTCGAAGCG GGTAAACGCT CCGCCAAAAT CTCCTTTGTT 
ATTACTGTCG TGCTTTCACT TCTCGCAGGA GTCCTCGTAT GGTAA 

 

Protein sequence

MWALFMIRNV KKQRPVNLDL QTIRFPITAI ASILHRVSGV ITFVAVGILL WLLGTSLSSP 
EGFEQASAIM GSFFVKFIMW GILTALAYHV VVGIRHMMMD FGYLEETFEA GKRSAKISFV 
ITVVLSLLAG VLVW