Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0767 |
Symbol | |
ID | 5594702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 778315 |
End bp | 778881 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640919943 |
Product | putative type 1 fimbrial protein |
Protein accession | YP_001457517 |
Protein GI | 157160199 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAG GACAAAAAAC ATTGGCCGCA CTGGCCGTAT CTCTGCTGTT CACAGCACCT GTTTATGCGG CTGATGAAGG ATCCGGTGAA ATTCACTTTA AAGGTGAAGT TATTGAAGCA CCGTGTGAAA TACATCAGGA TGATATTGAT AAAGAGGTTG AACTCGGTCA GGTGACCACC AGCCACATTA ATCAGTCACA TCACAGCGAT GCCGTTGCTG TCGACCTGCG CTTAGTCAAC TGTGATCTGG AAAACTCCAG CAACGGTTCC GGTGGCAAGA TTTCTAAAGT TGCAGTCACC TTTGATAGCT CAGCGAAAAC CACCGGCGCA GATCCGATTC TCAACAACAC CAGCACGGGT GAAGCCACCG GCGTCGGCGT ACGTTTAATG AATAAAGATC AAAGCAATAT CGTTTTAGGC ACCGCTACTC CAGATATCGA CCTGGCTCCG ACCTCCAGCG AACAAACGCT GAATTTCTTT GCCTGGATGG AACAAATTGA TCAGGCTACA CCTGTAACGC CAGGCGCAGT TACGGCGAAT GCAACCTACG TGCTGGATTA TAAATAA
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Protein sequence | MFKGQKTLAA LAVSLLFTAP VYAADEGSGE IHFKGEVIEA PCEIHQDDID KEVELGQVTT SHINQSHHSD AVAVDLRLVN CDLENSSNGS GGKISKVAVT FDSSAKTTGA DPILNNTSTG EATGVGVRLM NKDQSNIVLG TATPDIDLAP TSSEQTLNFF AWMEQIDQAT PVTPGAVTAN ATYVLDYK
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