Gene EcHS_A0767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0767 
Symbol 
ID5594702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp778315 
End bp778881 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content48% 
IMG OID640919943 
Productputative type 1 fimbrial protein 
Protein accessionYP_001457517 
Protein GI157160199 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAG GACAAAAAAC ATTGGCCGCA CTGGCCGTAT CTCTGCTGTT CACAGCACCT 
GTTTATGCGG CTGATGAAGG ATCCGGTGAA ATTCACTTTA AAGGTGAAGT TATTGAAGCA
CCGTGTGAAA TACATCAGGA TGATATTGAT AAAGAGGTTG AACTCGGTCA GGTGACCACC
AGCCACATTA ATCAGTCACA TCACAGCGAT GCCGTTGCTG TCGACCTGCG CTTAGTCAAC
TGTGATCTGG AAAACTCCAG CAACGGTTCC GGTGGCAAGA TTTCTAAAGT TGCAGTCACC
TTTGATAGCT CAGCGAAAAC CACCGGCGCA GATCCGATTC TCAACAACAC CAGCACGGGT
GAAGCCACCG GCGTCGGCGT ACGTTTAATG AATAAAGATC AAAGCAATAT CGTTTTAGGC
ACCGCTACTC CAGATATCGA CCTGGCTCCG ACCTCCAGCG AACAAACGCT GAATTTCTTT
GCCTGGATGG AACAAATTGA TCAGGCTACA CCTGTAACGC CAGGCGCAGT TACGGCGAAT
GCAACCTACG TGCTGGATTA TAAATAA
 
Protein sequence
MFKGQKTLAA LAVSLLFTAP VYAADEGSGE IHFKGEVIEA PCEIHQDDID KEVELGQVTT 
SHINQSHHSD AVAVDLRLVN CDLENSSNGS GGKISKVAVT FDSSAKTTGA DPILNNTSTG
EATGVGVRLM NKDQSNIVLG TATPDIDLAP TSSEQTLNFF AWMEQIDQAT PVTPGAVTAN
ATYVLDYK