Gene EcHS_A0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0720 
SymbolnagC 
ID5591761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp730663 
End bp731883 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content53% 
IMG OID640919898 
ProductN-acetylglucosamine repressor 
Protein accessionYP_001457472 
Protein GI157160154 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.00253244 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCAG GCGGACAAGC TCAGATAGGT AATGTTGATC TCGTAAAACA GCTTAACAGC 
GCGGCGGTTT ATCGCCTGAT TGACCAGTAC GGGCCAATCT CGCGGATTCA GATTGCCGAG
CAAAGCCAGC TTGCCCCCGC CAGCGTAACC AAAATTACGC GTCAGCTTAT CGAACGCGGG
CTGATCAAAG AAGTTGATCA GCAGGCCTCC ACCGGGGGCC GCCGCGCTAT CTCTATCGTC
ACCGAAACCC GCAATTTCCA CGCAATCGGT GTACGGCTTG GTCGTCACGA CGCCACCATT
ACTCTGTTTG ATCTCAGCAG CAAAGTGCTG GCAGAAGAAC ATTACCCGCT GCCGGAACGT
ACCCAGCAGA CGCTGGAACA TGCCCTGCTG AATGCCATTG CTCAGTTTAT TGATAGCTAC
CAACGCAAGC TGCGCGAGCT GATCGCCATT TCCGTGATCC TGCCTGGACT TGTTGACCCG
GACAGCGGCA AAATTCATTA CATGCCGCAT ATTCAGGTGG AAAACTGGGG GCTGGTAGAA
GCACTGGAAG AGCGTTTTAA AGTGACCTGT TTCGTTGGTC ACGATATCCG TAGTCTGGCG
CTGGCAGAGC ACTACTTCGG TGCAAGTCAG GATTGCGAAG ACTCCATTTT AGTGCGTGTC
CATCGCGGAA CCGGGGCCGG AATCATCTCT AACGGGCGCA TTTTTATTGG CCGCAACGGC
AACGTCGGTG AAATTGGCCA TATTCAGGTC GAACCGCTGG GTGAACGCTG CCACTGCGGC
AACTTTGGCT GCCTGGAAAC TATCGCCGCC AACGCTGCCA TTGAACAACG GGTGTTGAAT
CTGTTAAAGC AGGGCTACCA GAGCCGCGTG CCGCTGGACG ACTGTACCAT CAAAACTATC
TGCAAAGCTG CGAACAAAGG CGATAGCCTG GCGTCGGAAG TGATTGAGTA TGTTGGTCGT
CATCTGGGCA AAACCATCGC CATTGCCATC AACCTGTTTA ACCCGCAAAA AATTGTTATT
GCCGGAGAAA TCACCGAAGC CGATAAAGTG CTGCTCCCTG CTATTGAAAG CTGCATTAAT
ACCCAGGCGC TGAAGGCGTT TCGTACTAAT CTGCCGGTGG TACGTTCTGA GCTGGATCAC
CGCTCGGCAA TCGGCGCTTT TGCGCTGGTA AAACGCGCCA TGCTCAACGG TATTTTGCTC
CAGCATTTGC TGGAAAATTA A
 
Protein sequence
MTPGGQAQIG NVDLVKQLNS AAVYRLIDQY GPISRIQIAE QSQLAPASVT KITRQLIERG 
LIKEVDQQAS TGGRRAISIV TETRNFHAIG VRLGRHDATI TLFDLSSKVL AEEHYPLPER
TQQTLEHALL NAIAQFIDSY QRKLRELIAI SVILPGLVDP DSGKIHYMPH IQVENWGLVE
ALEERFKVTC FVGHDIRSLA LAEHYFGASQ DCEDSILVRV HRGTGAGIIS NGRIFIGRNG
NVGEIGHIQV EPLGERCHCG NFGCLETIAA NAAIEQRVLN LLKQGYQSRV PLDDCTIKTI
CKAANKGDSL ASEVIEYVGR HLGKTIAIAI NLFNPQKIVI AGEITEADKV LLPAIESCIN
TQALKAFRTN LPVVRSELDH RSAIGAFALV KRAMLNGILL QHLLEN