| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0685 |
|---|
| Symbol | rlpA |
|---|
| ID | 5594968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 700187 |
|---|
| End bp | 701275 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640919864 |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_001457446 |
|---|
| Protein GI | 157160128 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1.7076e-18 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAGC AGTGGCTCGG GATCTGCATC GCGGCAGGAA TGCTCGCGGC ATGTACAAGC
GATGATGGTC AGCAACAGAC GGTAAGTGTA CCGCAGCCTG CGGTATGTAA CGGCCCCATA
GTTGAAATTA GCGGGGCGGA CCCGCGTTTC GAACCACTGA ACGCGACGGC AAATCAGGAT
TACCAGCGCG ACGGTAAAAG CTACAAAATC GTGCAGGATC CGTCTCGATT TAGCCAGGCG
GGACTGGCGG CAATCTATGA TGCCGAACCA GGCAGTAACC TGACGGCCTC TGGCGAAGCT
TTCGATCCGA CACAGCTGAC GGCGGCCCAT CCAACGCTTC CGATCCCCAG CTACGCCAGA
ATCACTAACC TGGCTAACGG GCGAATGATC GTGGTGCGCA TTAATGATCG CGGCCCTTAC
GGCAACGACC GCGTTATTTC GCTTTCTCGC GCGGCAGCTG ACCGTCTTAA CACGTCAAAC
AACACCAAAG TTCGTATCGA TCCGATTATT GTCGCCCAGG ATGGTTCGCT TTCTGGTCCT
GGTATGGCTT GTACCACAGT CGCCAAACAG ACTTACGCCC TGCCTGCACC TCCCGATTTA
AGCGGTGGCG CGGGAACAAG TTCAGTGTCT GGCCCGCAGG GTGACATTCT TCCGGTCAGT
AATTCGACGC TAAAAAGCGA AGATCCGACC GGCGCGCCGG TAACCAGTAG CGGTTTCCTC
GGCGCACCAA CGACCTTAGC GCCTGGTGTA CTGGAAGGCA GCGAACCGAC GCCTGCGCCA
CAGCCCGTTG TTACAGCTCC GTCGACAACG CCTGCAACCT CGCCTGCAAT GGTGACACCG
CAAGCCGCCT CGCAAAGCGC CAGCGGTAAC TTTATGGTGC AAGTCGGGGC CGTTAGCGAT
CAGGCTCGTG CGCAACAGTA CCAACAGCAA CTGGGACAGA AGTTCGGCGT CCCCGGTCGC
GTAACTCAAA ATGGCGCGGT CTGGCGGATC CAGCTTGGCC CCTTCGCCAG CAAAGCCGAA
GCCAGTACCT TGCAGCAACG TTTGCAAACC GAAGCCCAAT TACAGTCATT TATTACCACC
GCGCAGTAG
|
|---|
| Protein sequence | MRKQWLGICI AAGMLAACTS DDGQQQTVSV PQPAVCNGPI VEISGADPRF EPLNATANQD
YQRDGKSYKI VQDPSRFSQA GLAAIYDAEP GSNLTASGEA FDPTQLTAAH PTLPIPSYAR
ITNLANGRMI VVRINDRGPY GNDRVISLSR AAADRLNTSN NTKVRIDPII VAQDGSLSGP
GMACTTVAKQ TYALPAPPDL SGGAGTSSVS GPQGDILPVS NSTLKSEDPT GAPVTSSGFL
GAPTTLAPGV LEGSEPTPAP QPVVTAPSTT PATSPAMVTP QAASQSASGN FMVQVGAVSD
QARAQQYQQQ LGQKFGVPGR VTQNGAVWRI QLGPFASKAE ASTLQQRLQT EAQLQSFITT
AQ
|
|---|
| |