Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0666 |
Symbol | citF |
ID | 5593591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 684119 |
End bp | 685651 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640919847 |
Product | citrate lyase alpha chain |
Protein accession | YP_001457429 |
Protein GI | 157160111 |
COG category | [C] Energy production and conversion |
COG ID | [COG3051] Citrate lyase, alpha subunit |
TIGRFAM ID | [TIGR01584] citrate lyase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCAGA AAATTGAACA ATCTCAACGA CAAGAACGGG TAGCGGCCTG GAATCGTCGC GCTGAATGCG ATCTTGCCGC TTTCCAGAAC TCACCAAAGC AAACCTACCA GGCTGAAAAA GTGCGCGATC GCAAACTGTG CGCCAACCTG GAAGAAGCGA TTCGTCGCTC TGGTTTACAG GACGGCATGA CGGTTTCCTT CCATCACGCT TTCCGTGGCG GTGACCTGAC CGTCAATATG GTGATGGACG TCATCGCGAA GATGGGCTTT AAAAACCTGA CCCTGGCGTC CAGCTCCCTG AGTGATTGCC ATGCGCCGCT GGTAGAACAC ATTCGCCAGG GCGTGGTTAC CCGCATTTAT ACCTCCGGCC TGCGTGGTCC ACTGGCGGAA GAGATCTCCC GTGGTCTGCT GGCGGAACCG GTGCAGATCC ACTCTCACGG CGGACGTGTG CATCTGGTAC AGAGCGGCGA ACTGAATATC GACGTGGCTT TCCTCGGCGT CCCGTCCTGT GATGAATTCG GTAATGCCAA CGGCTACACC GGTAAAGCCT GCTGCGGCTC CCTCGGCTAT GCAATGGTTG ATGCCGACAA CGCAAAACAG GTTGTGATGC TTACCGAAGA ACTGCTGCCT TATCCGCATA ATCCGGCAAG CATTGAGCAA GATCAGGTTG ATCTGATCGT CAAAGTTGAT CGCGTTGGCG ATGCTGCAAA AATCGGCGCT GGCGCTACCC GTATGACCAC TAACCCGCGC GAACTGCTTA TTGCCCGTAG CGCTGCGGAT GTGATTGTCA ACTCTGGCTA CTTCAAAGAA GGTTTCTCCA TGCAAACCGG CACCGGCGGC GCATCGCTGG CGGTAACCCG TTTCCTGGAA GACAAAATGC GTAGCCGCGA TATTCGCGCC GACTTCGCCC TTGGCGGTAT TACCGCGACG ATGGTTGACC TGCACGAAAA AGGTCTGATC CGCAAACTGC TGGATGTGCA GAGCTTTGAC AGCCATGCTG CGCAATCGCT GGCCCGTAAC CCCAATCACA TCGAAATCAG CGCCAACCAG TACGCTAACT GGGGTTCGAA AGGCGCATCG GTTGATCGTC TCGACGTGGT GGTACTGAGC GCGCTGGAAA TTGACACCCA GTTCAACGTT AACGTGCTGA CCGGCTCTGA CGGCGTACTG CGTGGTGCTT CCGGTGGTCA CTGCGATACC GCAATTGCCT CTGCGCTTTC CATCATCGTC GCGCCGCTGG TACGCGGTCG TATTCCGACT CTGGTGGATA ACGTGCTGAC CTGCATCACC CCGGGCTCCA GTGTCGATAT TCTGGTCACA GACCACGGTA TCGCAGTTAA CCCGGCACGT CCGGAACTGG CAGAACGTCT GCAGGAAGCG GGCATTAAAG TGGTTTCCAT TGAGTGGCTG CGCGAACGTG CGCGTCTGCT GACCGGTGAA CCACAGCCGA TTGAATTCAC CGACCGCGTC GTTGCCGTTG TGCGTTACCG CGATGGCTCG GTGATCGATG TTGTGCATCA GGTGAAGGAA TAA
|
Protein sequence | MTQKIEQSQR QERVAAWNRR AECDLAAFQN SPKQTYQAEK VRDRKLCANL EEAIRRSGLQ DGMTVSFHHA FRGGDLTVNM VMDVIAKMGF KNLTLASSSL SDCHAPLVEH IRQGVVTRIY TSGLRGPLAE EISRGLLAEP VQIHSHGGRV HLVQSGELNI DVAFLGVPSC DEFGNANGYT GKACCGSLGY AMVDADNAKQ VVMLTEELLP YPHNPASIEQ DQVDLIVKVD RVGDAAKIGA GATRMTTNPR ELLIARSAAD VIVNSGYFKE GFSMQTGTGG ASLAVTRFLE DKMRSRDIRA DFALGGITAT MVDLHEKGLI RKLLDVQSFD SHAAQSLARN PNHIEISANQ YANWGSKGAS VDRLDVVVLS ALEIDTQFNV NVLTGSDGVL RGASGGHCDT AIASALSIIV APLVRGRIPT LVDNVLTCIT PGSSVDILVT DHGIAVNPAR PELAERLQEA GIKVVSIEWL RERARLLTGE PQPIEFTDRV VAVVRYRDGS VIDVVHQVKE
|
| |