Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0655 |
Symbol | |
ID | 5591874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 672797 |
End bp | 673699 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640919836 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001457418 |
Protein GI | 157160100 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAATC TCTACGACTT GAAAAAGTTC GACTTAAATC TTCTTGTCAT ATTTGAGTGT ATTTACCAGC ATTTAAGCAT TAGCAAAGCT GCTGAATCAC TATATATCAC CCCATCAGCC GTGAGCCAGT CGTTACAACG CTTACGTGCG CAATTTAATG ACCCTTTATT CATTCGCTCA GGAAAAGGTA TCGCGCCGAC GACAACAGGG TTAAATCTGC ATCACCATCT TGAGAAAAAT CTCAGAGGCC TTGAACAAAC AATTAATATA GTCAATAAGT CCGAACTAAA GAAAAACTTT ATTATCTACG GCCCTCAGCT CATTTCTTGC TCTAATAATA GTATGCTGAT CCGCTGCCTA CGGCAAGATT CCTCTGTCGA GATTGAGTGC CATGATATCC TCATGTCAGC AGAGAATGCT GAAGAACTGT TGGTTCACCG CAAAGCCGAT CTGGTGATCA CCCAAATGCC AGTGATCAGC CGTTCCGTCA TTTGCATGCC ATTGCATACG ATTCGCAATA CTCTAATTTG TAGTAATAGG CATCCACGAA TTACTGACAA TAGCACTTAT GAACAAATTA TGGCAGAAGA GTTCACCCAA TTAATATCTA AATCAGCAGG GGTTGATGAT ATTCAAATGG AAATAGACGA GAGATTTATG AATCGCAAAA TCTCATTTCG TGGTTCCTCT TTGCTGACAA TCATTAATAG CATTGCAGTT ACAGATTTAC TGGGAATAGT CCCCTATGAA CTTTATAATT CCTACCGTGA CTTTCTTAAC TTAAAAGAGA TAAAACTAGA ACATCCGTTA CCTTCAATAA AGCTTTACAT TTCCTATAAT AAATCTTCTT TAAATAATTT GGTGTTCTCC CGATTTATTG ACCGTCTAAA TGAGAGTTTT TGA
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Protein sequence | MANLYDLKKF DLNLLVIFEC IYQHLSISKA AESLYITPSA VSQSLQRLRA QFNDPLFIRS GKGIAPTTTG LNLHHHLEKN LRGLEQTINI VNKSELKKNF IIYGPQLISC SNNSMLIRCL RQDSSVEIEC HDILMSAENA EELLVHRKAD LVITQMPVIS RSVICMPLHT IRNTLICSNR HPRITDNSTY EQIMAEEFTQ LISKSAGVDD IQMEIDERFM NRKISFRGSS LLTIINSIAV TDLLGIVPYE LYNSYRDFLN LKEIKLEHPL PSIKLYISYN KSSLNNLVFS RFIDRLNESF
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