Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0649 |
Symbol | cstA |
ID | 5595316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 665975 |
End bp | 668080 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640919830 |
Product | carbon starvation protein A |
Protein accession | YP_001457412 |
Protein GI | 157160094 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAT CAGGGAAATA CCTCGTCTGG ACAGTGCTCT CTGTAATGGG AGCATTTGCT CTGGGATACA TTGCTTTAAA TCGTGGGGAA CAGATCAACG CGCTGTGGAT TGTGGTGGCG TCGGTCTGTA TCTATCTGAT CGCTTACCGT TTTTATGGGC TGTATATCGC CAAAAATGTG CTGGCGGTTG ACCCGACGCG TATGACGCCA GCGGTGCGCC ATAACGACGG GCTGGACTAT GTGCCGACGG ACAAGAAAGT GCTGTTCGGT CACCATTTTG CGGCCATTGC CGGAGCAGGT CCGCTGGTGG GGCCGGTACT GGCGGCGCAA ATGGGCTACC TGCCGGGGAT GATCTGGCTG CTCGCTGGGG TGGTTCTCGC CGGTGCGGTG CAGGATTTCA TGGTACTGTT TGTTTCTACG CGCCGTGACG GTCGCTCGCT GGGTGAGCTG GTCAAAGAAG AGATGGGGCC AACCGCCGGG GTGATTGCGC TGGTGGCCTG CTTTATGATC ATGGTCATTA TCCTTGCAGT GCTGGCGATG ATCGTGGTGA AAGCCCTGAC TCATAGCCCG TGGGGAACAT ATACCGTTGC GTTCACCATT CCGCTGGCGC TGTTTATGGG GATCTACCTG CGCTATCTGC GTCCGGGGCG TATTGGCGAA GTGTCGGTCA TCGGTCTGGT ATTCCTGATT TTCGCCATTA TCTCTGGCGG CTGGGTGGCA GAAAGTCCGA CCTGGGCACC GTACTTTGAC TTTACCGGCG TGCAGTTGAC CTGGATGCTG GTGGGTTACG GTTTTGTGGC GGCGGTGCTG CCGGTGTGGT TACTGCTGGC CCCGCGTGAC TACCTCTCTA CCTTCCTGAA AATCGGGACT ATCGTCGGTC TGGCGGTAGG CATTTTGATT ATGCGCCCGA CGCTGACCAT GCCTGCGCTG ACCAAATTTG TCGATGGCAC TGGCCCGGTA TGGACCGGTA ACCTGTTCCC GTTCCTGTTT ATCACCATCG CCTGTGGCGC GGTGTCTGGC TTCCATGCGC TGATCTCTTC TGGGACCACG CCGAAGATGC TGGCGAACGA AGGGCAGGCG TGCTTTATCG GCTACGGTGG GATGTTAATG GAATCCTTCG TGGCGATTAT GGCGCTGGTT TCCGCCTGTA TCATCGATCC GGGCGTGTAT TTTGCCATGA ACAGCCCGAT GGCGGTGCTG GCTCCGGCAG GGACGGCGGA TGTGGTCGCT TCTGCCGCGC AGGTGGTGAG TAGCTGGGGC TTTAGCATTA CACCAGATAC GCTAAACCAG ATTGCCAGCG AAGTGGGTGA ACAGTCGATC ATTTCCCGTG CGGGCGGTGC GCCGACGCTG GCGGTGGGGA TGGCCTACAT TCTGCACGGC GCGCTGGGCG GCATGATGGA TGTGGCGTTC TGGTATCACT TCGCCATTTT GTTTGAAGCA CTGTTTATTC TGACGGCGGT GGATGCAGGT ACGCGTGCTG CGCGCTTTAT GTTGCAGGAT CTGCTGGGCG TGGTGTCTCC TGGCCTGAAG CGGACCGATT CACTGCCTGC TAACCTGCTG GCAACAGCGC TGTGCGTACT GGCGTGGGGC TACTTCCTCC ATCAGGGCGT GGTCGATCCG CTGGGCGGCA TTAACACTCT GTGGCCGCTG TTTGGTATTG CCAACCAGAT GCTGGCAGGG ATGGCGCTGA TGCTCTGTGC CGTGGTGTTG TTCAAGATGA AACGTCAACG TTACGCCTGG GTGGCGCTGG TACCAACGGC CTGGCTGCTG ATTTGTACCC TGACCGCAGG CTGGCAGAAA GCGTTTAGCC CGGATGCGAA AGTCGGCTTC CTGGCCATTG CTAATAAGTT CCAGGCAATG ATCGACAGCG GCAATATTCC GTCGCAGTAT ACTGAGTCAC AGCTGGCGCA ACTGGTGTTC AACAACCGTC TGGATGCCGG GTTAACCATC TTCTTTATGG TGGTCGTGGT GGTTCTGGCA CTGTTCTCGA TTAAGACGGC ACTGGCGGCA TTGAAAGATC CGAAGCCAAC GGCGAAAGAA ACGCCGTATG AACCAATGCC GGAAAATGTC GAGGAGATCG TGGCGCAGGC AAAAGGCGCA CACTAA
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Protein sequence | MNKSGKYLVW TVLSVMGAFA LGYIALNRGE QINALWIVVA SVCIYLIAYR FYGLYIAKNV LAVDPTRMTP AVRHNDGLDY VPTDKKVLFG HHFAAIAGAG PLVGPVLAAQ MGYLPGMIWL LAGVVLAGAV QDFMVLFVST RRDGRSLGEL VKEEMGPTAG VIALVACFMI MVIILAVLAM IVVKALTHSP WGTYTVAFTI PLALFMGIYL RYLRPGRIGE VSVIGLVFLI FAIISGGWVA ESPTWAPYFD FTGVQLTWML VGYGFVAAVL PVWLLLAPRD YLSTFLKIGT IVGLAVGILI MRPTLTMPAL TKFVDGTGPV WTGNLFPFLF ITIACGAVSG FHALISSGTT PKMLANEGQA CFIGYGGMLM ESFVAIMALV SACIIDPGVY FAMNSPMAVL APAGTADVVA SAAQVVSSWG FSITPDTLNQ IASEVGEQSI ISRAGGAPTL AVGMAYILHG ALGGMMDVAF WYHFAILFEA LFILTAVDAG TRAARFMLQD LLGVVSPGLK RTDSLPANLL ATALCVLAWG YFLHQGVVDP LGGINTLWPL FGIANQMLAG MALMLCAVVL FKMKRQRYAW VALVPTAWLL ICTLTAGWQK AFSPDAKVGF LAIANKFQAM IDSGNIPSQY TESQLAQLVF NNRLDAGLTI FFMVVVVVLA LFSIKTALAA LKDPKPTAKE TPYEPMPENV EEIVAQAKGA H
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