Gene EcHS_A0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0621 
SymbolcusB 
ID5591237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp633573 
End bp634796 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content56% 
IMG OID640919802 
Productcopper/silver efflux system membrane fusion protein CusB 
Protein accessionYP_001457384 
Protein GI157160066 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000000000664889 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCGCGCTTAT TATCGGCAGC ATGATCGCGG GCGGTATTAT TTCTGCGGCA 
GGTTTTACCT GGGTTGCAAA GGCGGAACCG CCTGCAGAAA AAACGTCGAC CGCAGAACGT
AAAATCTTAT TCTGGTACGA CCCAATGTAT CCCAATACGC GGTTCGATAA ACCAGGTAAA
TCGCCGTTTA TGGATATGGA TCTGGTGCCG AAATATGCCG ATGAAGAGAG TTCTGCGTCT
GGTGTGCGCA TTGACCCGAC TCAGACGCAG AATCTGGGGG TGAAAACGGC TACCGTCACG
CGCGGACCGC TGACTTTTGC CCAGAGTTTC CCGGCGAATG TCAGTTACAA CGAGTATCAG
TATGCCATTG TGCAGGCTCG CGCTGCCGGG TTTATCGACA AGGTGTATCC GCTTACCGTG
GGCGATAAAG TACAAAAGGG CACACCGCTT CTCGACCTGA CCATTCCTGA CTGGGTGGAA
GCGCAGAGTG AGTATTTACT GCTGCGCGAA ACCGGCGGTA CGGCGACCCA GACTGAAGGC
ATTCTTGAGC GGCTGCGACT GGCGGGAATG CCGGAGGCGG ATATTCGCCG CCTGATCGCC
ACGCAAAAAA TCCAGACACG CTTTACGCTC AAAGCGCCCA TTGATGGCGT GATCACCGCG
TTTGATCTGC GCGCGGGAAT GAATATCGCC AAAGATAACG TGGTAGCGAA AATTCAGGGT
ATGGACCCGG TGTGGGTCAC TGCTGCGATC CCGGAGTCTA TCGCCTGGCT GGTGAAAGAT
GCCTCGCAGT TTACCCTCAC CGTTCCGGCG CGACCGGATA AAACACTCAC CATCCGCAAA
TGGACGCTGC TACCTGGCGT GGATGCCGCG ACCCGCACGC TGCAGCTGCG TCTGGAAGTC
GACAACGCCG ACGAGGCGCT AAAACCGGGC ATGAACGCCT GGTTGCAACT CAACACCGCC
AGCGAACCGA TGCTGCTCAT TCCGTCACAA GCGCTGATTG ATACCGGCAG CGAACAGCGG
GTGATTACCG TTGATGCCGA CGGGCGCTTT GTACCGAAAC GCGTTGCTGT TTTCCAGGCA
TCGCAAGGCG TCACCGCATT ACGCTCTGGT CTGGCGGAAG GTGAAAAGGT GGTTTCCAGC
GGCCTGTTCC TGATTGATTC CGAAGCCAAT ATTTCTGGCG CACTGGAGCG GATGCGCTCT
GAAAGTGCTA CCCATGCGCA TTGA
 
Protein sequence
MKKIALIIGS MIAGGIISAA GFTWVAKAEP PAEKTSTAER KILFWYDPMY PNTRFDKPGK 
SPFMDMDLVP KYADEESSAS GVRIDPTQTQ NLGVKTATVT RGPLTFAQSF PANVSYNEYQ
YAIVQARAAG FIDKVYPLTV GDKVQKGTPL LDLTIPDWVE AQSEYLLLRE TGGTATQTEG
ILERLRLAGM PEADIRRLIA TQKIQTRFTL KAPIDGVITA FDLRAGMNIA KDNVVAKIQG
MDPVWVTAAI PESIAWLVKD ASQFTLTVPA RPDKTLTIRK WTLLPGVDAA TRTLQLRLEV
DNADEALKPG MNAWLQLNTA SEPMLLIPSQ ALIDTGSEQR VITVDADGRF VPKRVAVFQA
SQGVTALRSG LAEGEKVVSS GLFLIDSEAN ISGALERMRS ESATHAH