Gene EcHS_A0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0609 
Symbol 
ID5591971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp622868 
End bp623383 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content50% 
IMG OID640919793 
Productputative fimbrial protein 
Protein accessionYP_001457376 
Protein GI157160058 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.87429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAG TACTCTTTAG CTGTTTCTGC GGGTTACTGT GGAGTTCCAG TGGATGGGCA 
GCTGACCCTT TAGGAACGAT TAATATCAAT TTGCACGGTA ACGTTGTTGA TTTCTCCTGT
ACCGTAAACA CAGCGGATAT TGATAAGACG GTAGATTTAG GCAGATGGCC TACGACACAA
TTACTGAACG CTGGCGATAC CACGGCACTC GTCCCTTTTA GCCTGCGGCT GGAGGGATGT
CCTCCGGGTT CAGTTGCGAT TTTATTTACG GGAACGCCGG CATCCGATAC CAACCTGCTG
GCTCTGGATG ATCCCGCAAT GGCACAAACC GTCGCCATCG AATTACGTAA TAGCGATCGC
TCCCGGCTCG CACTGGGGGA GGCGAGCCCG ACTGAGGAAG TAGATGCAAA TGGCAATGTC
ACACTAAACT TTTTTGCCAA TTATCGAGCG TTAGCCAGCG GTGTTCGGCC AGGTGTGGCG
AAAGCGGATG CGATATTTAT GATCAATTAT AATTAA
 
Protein sequence
MRRVLFSCFC GLLWSSSGWA ADPLGTININ LHGNVVDFSC TVNTADIDKT VDLGRWPTTQ 
LLNAGDTTAL VPFSLRLEGC PPGSVAILFT GTPASDTNLL ALDDPAMAQT VAIELRNSDR
SRLALGEASP TEEVDANGNV TLNFFANYRA LASGVRPGVA KADAIFMINY N