Gene EcHS_A0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0568 
Symbol 
ID5593859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp581022 
End bp581939 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content53% 
IMG OID640919753 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionYP_001457336 
Protein GI157160018 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATCT TTATCCCGAT TCTCATTTTT GTCGCGCTGG TCATTGTCGG CGCGGGCGTC 
AAAATCGTGC CGCAGGGCTA TCAATGGACG GTAGAACGTT TTGGTCGCTA TACCAAAACG
TTACAGCCGG GGCTCAGTCT GGTGGTGCCG TTTATGGATC GCATTGGTCG CAAGATCAAT
ATGATGGAGC AAGTGCTCGA TATCCCTTCC CAGGAAGTTA TCTCGAAAGA TAACGCCAAC
GTTACCATCG ACGCAGTCTG TTTTATTCAG GTGATTGACG CGCCGCGCGC GGCTTATGAA
GTCAGCAATC TGGAGCTGGC GATCATCAAC CTGACCATGA CTAACATCCG TACCGTGTTG
GGTTCAATGG AACTTGACGA AATGCTCTCT CAGCGCGACA GCATCAACTC ACGCCTGCTG
CGTATTGTCG ATGAAGCCAC CAACCCGTGG GGGATTAAAG TCACCCGTAT TGAAATTCGC
GACGTGCGCC CACCGGCAGA GCTTATCTCT TCAATGAACG CGCAGATGAA AGCGGAACGT
ACCAAACGCG CTTACATTCT TGAAGCGGAA GGGATCCGTC AGGCGGAAAT CCTCAAAGCC
GAAGGTGAAA AACAGTCGCA AATCCTGAAA GCGGAAGGCG AACGTCAGTC GGCGTTTTTA
CAGGCTGAAG CGCGTGAACG TTCCGCCGAA GCAGAAGCCC GCGCCACCAA AATGGTGTCT
GAAGCTATCG CCTCCGGTGA TATTCAGGCG GTGAACTACT TCGTAGCGCA GAAATACACC
GAAGCGTTAC AGCAGATCGG TTCCTCCAGT AACAGCAAAG TAGTGATGAT GCCATTAGAG
GCCAGCAGCC TGATGGGGTC GATTGCCGGG ATTGCCGAGC TGGTGAAAGA CAGCGCCAAC
AAACGGACTC AGCCATGA
 
Protein sequence
MLIFIPILIF VALVIVGAGV KIVPQGYQWT VERFGRYTKT LQPGLSLVVP FMDRIGRKIN 
MMEQVLDIPS QEVISKDNAN VTIDAVCFIQ VIDAPRAAYE VSNLELAIIN LTMTNIRTVL
GSMELDEMLS QRDSINSRLL RIVDEATNPW GIKVTRIEIR DVRPPAELIS SMNAQMKAER
TKRAYILEAE GIRQAEILKA EGEKQSQILK AEGERQSAFL QAEARERSAE AEARATKMVS
EAIASGDIQA VNYFVAQKYT EALQQIGSSS NSKVVMMPLE ASSLMGSIAG IAELVKDSAN
KRTQP