Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0559 |
Symbol | |
ID | 5592601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 573351 |
End bp | 574145 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640919744 |
Product | GumN family protein |
Protein accession | YP_001457327 |
Protein GI | 157160009 |
COG category | [S] Function unknown |
COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCTGT TGTACCGGGT AAAAACGCTT TGGGCCGCGC TGCGCGGTAA TCATTACACC TGGCCTGCCA TCGATATCAC CCTTCCCGGC AATCGCCATT TTCATCTGAT TGGCAGTATT CATATGGGTA GCCACGATAT GGCTCCCCTG CCCACCCGTT TGCTCAAAAA GCTCAAAAAC GCCGATGCGC TGATCGTCGA GGCGGATGTT TCCACCAGCG ATACGCCTTT TGCTAATTTG CCTACTTGCG AGGCGCTGGA AGAGCGCATT AACGAGGAGC AACTCCAAAA TCTGCAGCAC ATTAGCCAGG AGATGGGCAT TTCTCCGTCG CTCTTTTCTA CTCAACCGCT GTGGCAAATC GCGATGGTTC TTCAGGCGAC GCAGGCACAA AAACTGGGGC TGCGGGCAGA ATACGGTATC GATTACCAGT TATTGCAGGC GGCGAAGCAA CAACATAAAC CCGTGATTGA ACTGGAAGGG GCTGAAAACC AGATTACCAT GTTGCTCCAG CTCCCTGACA AAGGACTGGC GCTGCTGGAC GATACGCTGA CCCACTGGCA TACCAACGCA CGGTTGCTGC AACAAATGAT GAGCTGGTGG CTGAATGCAC CTCCGCAAAA TAATGATATA ACGCTGCCCA ATACGTTCAG TCAGTCGCTG TACGATGTGC TGATGCATCA GCGAAATCTC GCCTGGCGGG ATAAATTACG CGCCATGCCG CCGGGGCGAT ATGTGGTCGC GGTCGGTGCA CTACACCTGT ATGGAGAAGG GAATTTGCCG CAAATGTTGC GCTAA
|
Protein sequence | MDLLYRVKTL WAALRGNHYT WPAIDITLPG NRHFHLIGSI HMGSHDMAPL PTRLLKKLKN ADALIVEADV STSDTPFANL PTCEALEERI NEEQLQNLQH ISQEMGISPS LFSTQPLWQI AMVLQATQAQ KLGLRAEYGI DYQLLQAAKQ QHKPVIELEG AENQITMLLQ LPDKGLALLD DTLTHWHTNA RLLQQMMSWW LNAPPQNNDI TLPNTFSQSL YDVLMHQRNL AWRDKLRAMP PGRYVVAVGA LHLYGEGNLP QMLR
|
| |