Gene EcHS_A0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0540 
SymbolacrR 
ID5590989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp551826 
End bp552473 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content45% 
IMG OID640919724 
ProductDNA-binding transcriptional repressor AcrR 
Protein accessionYP_001457308 
Protein GI157159990 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGAA AAACCAAACA AGAAGCGCAA GAAACGCGCC AACACATCCT CGATGTGGCT 
CTACGTCTTT TCTCACAGCA GGGGGTATCA TCCACCTCGC TGGGCGAGAT TGCAAAAGCA
GCTGGCGTTA CGCGCGGTGC AATCTACTGG CATTTTAAAG ACAAGTCGGA TTTGTTCAGT
GAGATCTGGG AACTGTCAGA ATCCAATATT GGTGAACTAG AGCTTGAGTA TCAGGCAAAA
TTCCCTGGCG ATCCACTCTC AGTATTAAGA GAGATATTAA TTCATGTTCT TGAATCCACG
GTGACAGAAG AACGGCGTCG ATTATTGATG GAGATTATAT TCCACAAATG CGAATTTGTC
GGAGAAATGG CTGTTGTGCA ACAGGCACAA CGTAATCTCT GTCTGGAAAG TTATGACCGT
ATAGAACAAA CGTTAAAACA TTGTATTGAA GCGAAAATGT TGCCTGCGGA TTTAATGACG
CGTCGCGCAG CAATTATTAT GCGCGGCTAT ATTTCCGGCC TGATGGAAAA CTGGCTCTTT
GCCCCGCAAT CTTTTGATCT TAAAAAAGAA GCCCGCGATT ACGTTGCCAT CTTACTGGAG
ATGTATCTCC TGTGCCCCAC GCTTCGTAAT CCTGCCACTA ACGAATAA
 
Protein sequence
MARKTKQEAQ ETRQHILDVA LRLFSQQGVS STSLGEIAKA AGVTRGAIYW HFKDKSDLFS 
EIWELSESNI GELELEYQAK FPGDPLSVLR EILIHVLEST VTEERRRLLM EIIFHKCEFV
GEMAVVQQAQ RNLCLESYDR IEQTLKHCIE AKMLPADLMT RRAAIIMRGY ISGLMENWLF
APQSFDLKKE ARDYVAILLE MYLLCPTLRN PATNE