| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0533 |
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| Symbol | |
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| ID | 5590916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 543132 |
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| End bp | 544688 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640919717 |
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| Product | cyclic diguanylate phosphodiesterase domain-containing protein |
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| Protein accession | YP_001457301 |
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| Protein GI | 157159983 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGTGA GAACACGACA TCTGGTCGGC CTTATTTCGG GAGTACTGAT TCTTTCAGTA
TTGCTGCCTG TCGGCTTAAG CATCTGGCTG GCCCATCAGC AGGTAGAAAC ATCGTTTATT
GAAGAGCTGG ATACCTATTC CTCCCGCGTC GCTATTCGAG CCAATAAGGT GGCGACACAA
GGGAAAGATG CGCTGCAGGA GCTGGAAAGA TGGCAAGGCG CTGCCTGTAG CGAAGCCCAT
CTCATGGAAA TGCGTCGGGT ATCTTACAGT TATCGCTATA TTCAGGAAGT GGCTTATATC
GATAACAACG TTCCCCAGTG TTCGTCTCTG GAGCATGAAA GTCCGCCCGA TACCTTCCCC
GAGCCAGGTA AAATTTCGAA AGATGGTTAT CGTGTCTGGT TAACATCGCA TAACGATTTA
GGCATTATCC GTTACATGGT CGCCATGGGA ACGGCACATT ATGTCGTCAT GATCGACCCC
GCTTCCTTTA TTGATGTCAT TCCCTATAGC TCATGGCAAA TTGATGCCGC CATTATTGGC
AATGCCCATA ACGTTGTCAT AACCAGCAGC GATGAAATTG CTCAGGGAAT TATTACCAGG
CTACAAAAAA CACCCGGTGA GCATATCGAA AATAATGGAA TCATTTACGA TATCCTGCCC
TTACCGGAGA TGAATATTTC GATCATCACA TGGGCTTCAA CGAAAATGTT GCAGAAAGGC
TGGCATCGGC AAGTCTTTAT TTGGTTACCG CTCGGGTTGG TGATTGGCCT GCTGGCAGCG
ATGTTTGTGC TGCGTATTTT GCGCCGTATT CAGTCACCGC ATCATCGGCT GCAGGATGCT
ATCGATAATC GTGATATTTG CGTGCACTAT CAGCCGATTG TCTCCTTAGC CAATGGCAAA
ATTGTCGGTG CTGAGGCACT GGCGCGCTGG CCGCAGACAG ACGGTAGTTG GTTGTCACCA
GATAGTTTTA TTCCGCTGGC ACAGCAAACG GGCCTTTCTG AGCCATTGAC GCTACTGATT
ATAAGAAGCG TCTTTGAAGA TATGGGCGAC TGGCTGCGTC AGCATCCACA GCAGCATATT
TCGATCAATC TTGAATCCCC CGTGCTCACC TCGGAAAAAA TCCCGCAATT GCTGCGTGAC
ATGATCAATC ACTATCAGGT TAATCCCAGA CAGATCGCGC TTGAACTCAC TGAACGCGAG
TTTGCCGATC CGAAAACCAG CGCCCCGATA ATTTCTCGCT ACCGGGAGGC GGGCCATGAA
ATTTATCTTG ATGATTTTGG TACGGGGTAT TCAAGTTTAA GTTATTTACA GGATCTGGAT
GTCGACATTC TGAAGATCGA TAAATCTTTC GTTGATGCGC TGGAATATAA AAATGTCACG
CCGCATATCA TCGAAATGGC AAAAACACTG AAACTGAAAA TGGTAGCGGA GGGAATCGAA
ACCAGTAAAC AAGAAGAGTG GTTACGCCAG CATGGCGTGC ACTACGGTCA GGGCTGGCTC
TACAGCAAGG CATTACCGAA AGAAGATTTC TTACGCTGGG CCGAGCAACA TTTGTGA
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| Protein sequence | MLVRTRHLVG LISGVLILSV LLPVGLSIWL AHQQVETSFI EELDTYSSRV AIRANKVATQ
GKDALQELER WQGAACSEAH LMEMRRVSYS YRYIQEVAYI DNNVPQCSSL EHESPPDTFP
EPGKISKDGY RVWLTSHNDL GIIRYMVAMG TAHYVVMIDP ASFIDVIPYS SWQIDAAIIG
NAHNVVITSS DEIAQGIITR LQKTPGEHIE NNGIIYDILP LPEMNISIIT WASTKMLQKG
WHRQVFIWLP LGLVIGLLAA MFVLRILRRI QSPHHRLQDA IDNRDICVHY QPIVSLANGK
IVGAEALARW PQTDGSWLSP DSFIPLAQQT GLSEPLTLLI IRSVFEDMGD WLRQHPQQHI
SINLESPVLT SEKIPQLLRD MINHYQVNPR QIALELTERE FADPKTSAPI ISRYREAGHE
IYLDDFGTGY SSLSYLQDLD VDILKIDKSF VDALEYKNVT PHIIEMAKTL KLKMVAEGIE
TSKQEEWLRQ HGVHYGQGWL YSKALPKEDF LRWAEQHL
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