Gene EcHS_A0530 details

Gene Information

• Locus tag: EcHS_A0530
• ID: 5594871
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 541444
• End bp: 542016
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640919713
• Product: putative lipoprotein
• Protein accession: YP_001457298
• Protein GI: 157159980
• COG category: [S] Function unknown
• COG ID: [COG3126] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 72
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCG TGCACATGGC CAGTGGTTTA GCGGTTGCGA TTGCGTTGGC GGCTTGCGCA 
GATAAAAGCG CGGATATTCA GACGCCAGCA CCGGCTGCAA ATACGTCTAT TTCAGCAACA 
CAACAACCAG CTATCCAGCA ACCGAATGTC TCCGGTACCG TCTGGATCCG TCAGAAAGTC 
GCACTGCCGC CTGATGCTGT GCTGACCGTG ACACTTTCTG ACGCGTCGTT AGCCGATGCA 
CCGTCAAAAG TGCTGGCGCA GAAAGCGGTG CGTACTGAAG GTAAACAGTC ACCATTCAGC 
TTTGTTCTGC CATTTAACCC GGCAGATGTT CAGCCGAACG CGCGTATTCT GTTGAGTGCG 
GCGATTACCG TGAATGACAA ACTGGTATTT ATCACCGATA CCGTTCAGCC GGTGATCAAC 
CAGGGCGGAA CTAAAGCCGA CCTGACATTG GTGCCGGTAC AGCAAACCGC CGTGCCGGTT 
CAGGCCAGCG GTGGCGCAAC GACTACCGTA CCTTCGACTT CACCAACTCA GGTGAATCCG 
TCTTCGGCAG TTCCAGCTCC TACGCAATAT TAA 

 

Protein sequence

MKLVHMASGL AVAIALAACA DKSADIQTPA PAANTSISAT QQPAIQQPNV SGTVWIRQKV 
ALPPDAVLTV TLSDASLADA PSKVLAQKAV RTEGKQSPFS FVLPFNPADV QPNARILLSA 
AITVNDKLVF ITDTVQPVIN QGGTKADLTL VPVQQTAVPV QASGGATTTV PSTSPTQVNP 
SSAVPAPTQY