Gene EcHS_A0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0504 
SymbolcyoD 
ID5594150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp513781 
End bp514110 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content50% 
IMG OID640919687 
Productcytochrome o ubiquinol oxidase subunit IV 
Protein accessionYP_001457272 
Protein GI157159954 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0322106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATT CTACCGATCA CAGCGGCGCG TCCCATGGCA GCGTAAAAAC CTACATGACA 
GGCTTTATCC TGTCGATCAT TCTGACGGTG ATTCCGTTCT GGATGGTGAT GACAGGGGCT
GCCTCTCCGG CCGTAATTCT GGGAACAATC CTGGCAATGG CAGTGGTACA GGTTCTGGTG
CATCTGGTGT GCTTCCTGCA CATGAATACC AAATCAGATG AAGGCTGGAA CATGACGGCG
TTTGTCTTCA CCGTGCTAAT CATCGCTATC CTGGTTGTAG GCTCCATCTG GATTATGTGG
AACCTCAACT ACAACATGAT GATGCACTAA
 
Protein sequence
MSHSTDHSGA SHGSVKTYMT GFILSIILTV IPFWMVMTGA ASPAVILGTI LAMAVVQVLV 
HLVCFLHMNT KSDEGWNMTA FVFTVLIIAI LVVGSIWIMW NLNYNMMMH