| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0489 |
|---|
| Symbol | pgpA |
|---|
| ID | 5594311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 500381 |
|---|
| End bp | 500899 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640919672 |
|---|
| Product | phosphatidylglycerophosphatase A |
|---|
| Protein accession | YP_001457257 |
|---|
| Protein GI | 157159939 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1267] Phosphatidylglycerophosphatase A and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 81 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTT TGCCACGCCA TAAAGATGTC GCGAAAAGTC GCCTGAAGAT GAGTAATCCG
TGGCATCTGC TTGCTGTCGG ATTCGGAAGT GGATTAAGCC CAATCGTTCC TGGCACGATG
GGATCGCTGG CAGCGATTCC GTTCTGGTAT CTGATGACCT TTTTACCCTG GCAGCTCTAC
TCGCTGGTGG TGATGTTGGG GATCTGTATC GGCGTCTATC TTTGTCATCA AACGGCGAAA
GATATGGGCG TGCACGATCA CGGCAGCATT GTCTGGGACG AATTTATTGG TATGTGGATC
ACGCTCATGG CGCTGCCGAC CAATGACTGG CAGTGGGTTG CCGCCGGGTT TGTGATTTTC
CGTATTCTGG ATATGTGGAA GCCGTGGCCG ATCCGCTGGT TTGATCGCAA TGTACATGGC
GGCATGGGGA TCATGATCGA CGATATTGTC GCCGGGGTGA TTTCCGCAGG CATCCTGTAC
TTTATCGGTC ATCACTGGCC GCTGGGTATT CTGTCGTAG
|
|---|
| Protein sequence | MTILPRHKDV AKSRLKMSNP WHLLAVGFGS GLSPIVPGTM GSLAAIPFWY LMTFLPWQLY
SLVVMLGICI GVYLCHQTAK DMGVHDHGSI VWDEFIGMWI TLMALPTNDW QWVAAGFVIF
RILDMWKPWP IRWFDRNVHG GMGIMIDDIV AGVISAGILY FIGHHWPLGI LS
|
|---|
| |