| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0488 |
|---|
| Symbol | thiL |
|---|
| ID | 5594310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 499426 |
|---|
| End bp | 500403 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640919671 |
|---|
| Product | thiamine monophosphate kinase |
|---|
| Protein accession | YP_001457256 |
|---|
| Protein GI | 157159938 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 73 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATGTG GCGAGTTCTC CCTGATTGCC CGTTATTTTG ACCGTGTAAG AAGTTCTCGT
CTTGATGTCG AACTGGGCAT CGGCGACGAT TGCGCTCTTC TCAATATCCC CGAGAAACAG
ACCCTGGCGA TCAGCACTGA TACGCTGGTG GCGGGCAACC ACTTCCTCCA TGATATCGAT
CCTGCTGATC TGGCGTATAA AGCACTGGCG GTGAACCTAA GCGATCTGGC AGCGATGGGG
GCCGATCCGG CCTGGCTGAC GCTGGCATTA ACCTTACCGG ACGTAGACGA AGCGTGGCTT
GAGTCCTTCA GCGACAGTTT GTTTGATCTT CTCAATTATT ACGATATGCA ACTCATTGGC
GGCGATACCA CGCGTGGGCC ATTATCAATG ACGTTGGGTA TCCACGGCTT TGTTCCGATG
GGACGAGCCT TAACGCGCTC TGGAGCGAAA CCGGGTGACT GGATCTATGT GACCGGTACA
CCGGGCGATA GCGCCGCCGG GCTGGCGATT TTGCAAAACC GTTTGCAGGT TGCCGATGCT
AAAGATGCGG ACTACTTGAT CAAACGTCAT CTCCGTCCAT CGCCGCGTAT TTTACAGGGA
CAGGCACTGC GCGATCTGGC AAATTCAGCT ATCGATCTCT CTGACGGTCT GATTTCCGAT
CTCGGGCATA TCGTGAAAGC CAGCGACTGC GGCGCACGTA TTGACCTGGC ATTGCTGCCG
TTTTCTGATG CGCTTTCTCG CCATGTTGAA CCGGAACAGG CGCTGCGCTG GGCGCTCTCT
GGCGGTGAAG ATTACGAGTT GTGTTTCACT GTGCCGGAAC TGAACCGTGG CGCGCTGGAT
GTGGCTCTCG GACACCTGGG CGTACCGTTT ACCTGTATCG GGCAAATGAC CGCCGATATC
GAAGGGCTTT GTTTTATTCG TGACGGCGAA CCTGTCACGT TTGACTGGAA AGGATATGAC
CATTTTGCCA CGCCATAA
|
|---|
| Protein sequence | MACGEFSLIA RYFDRVRSSR LDVELGIGDD CALLNIPEKQ TLAISTDTLV AGNHFLHDID
PADLAYKALA VNLSDLAAMG ADPAWLTLAL TLPDVDEAWL ESFSDSLFDL LNYYDMQLIG
GDTTRGPLSM TLGIHGFVPM GRALTRSGAK PGDWIYVTGT PGDSAAGLAI LQNRLQVADA
KDADYLIKRH LRPSPRILQG QALRDLANSA IDLSDGLISD LGHIVKASDC GARIDLALLP
FSDALSRHVE PEQALRWALS GGEDYELCFT VPELNRGALD VALGHLGVPF TCIGQMTADI
EGLCFIRDGE PVTFDWKGYD HFATP
|
|---|
| |