Gene EcHS_A0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0424 
Symbol 
ID5595105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp446125 
End bp446565 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content45% 
IMG OID640919609 
Productputative acyltransferase 
Protein accessionYP_001457194 
Protein GI157159876 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGGCG CAAACTGCCT GATAGGTAAT TATGCGTTTA TTCGTCCTGG CACAATAATC 
AGCAATGGTG TAAAAATTGG TTTTGCCACC GAAATTAAAA ATGCGGTTAT TGAAGCGGAA
GCAACGATTG GTCCGCAATG TTTTATTGCC GACTCGGTAG TTGCAAACCA GGCATATTTG
GGCGCACAAG TACGTACCAG TAATCATCGT CTGGATGAAC AGCCTGTGTC TGTTCGAACT
CCAGAGGGAA TTATCGCTAC CGGATGCGAT AAATTAGGTT GTTATATCGG GCAGCGTTCA
CGCCTTGGCG TACAAGTTAT AATTTTGCCT GGGCGAATTA TTTCCCCGAA CACGCAACTT
GGCCCGCGCG TGATTGTAGA ACGTAATTTA CCTGCCGGAA CTTATTCACT CCGACAAGAA
CTTATCCGTA CAGGAGATTA A
 
Protein sequence
MIGANCLIGN YAFIRPGTII SNGVKIGFAT EIKNAVIEAE ATIGPQCFIA DSVVANQAYL 
GAQVRTSNHR LDEQPVSVRT PEGIIATGCD KLGCYIGQRS RLGVQVIILP GRIISPNTQL
GPRVIVERNL PAGTYSLRQE LIRTGD