Gene EcHS_A0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0417 
Symbol 
ID5593112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp439563 
End bp440774 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content57% 
IMG OID640919602 
Productputative 3-hydroxyphenylpropionic transporter MhpT 
Protein accessionYP_001457187 
Protein GI157159869 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones77 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACTC GTACCCCTTC ATCATCTTCA TCCCGCCTGA TGCTGACCAT CGGGCTTTGT 
TTTTTGGTCG CTCTGATGGA AGGGCTGGAT CTTCAGGCGG CTGGCATTGC GGCGGGTGGC
ATCGCCCAGG CTTTCGCACT CGATAAAATG CAAATGGGCT GGATATTTAG CGCCGGAATA
CTCGGTTTGC TACCCGGCGC GTTGGTTGGC GGGATGCTGG CAGACCGTTA TGGTCGTAAG
CGTATTTTGA TTGGCTCAGT TGCGCTGTTT GGTTTGTTCT CACTGGCAAC GGCGATTGCC
TGGGATTTCC CCTCACTGGT CTTTGCGCGG CTGATGACCG GTGTCGGGCT GGGGGCGGCG
TTGCCGAATC TTATCGCTCT GACGTCTGAA GCCGCGGGTC CACGTTTTCG TGGGACGGCA
GTGAGCCTGA TGTATTGCGG TGTTCCCATT GGCGCGGCGC TGGCGGCGAC ACTGGGTTTC
GCGGGGGCAA ACTTAGCATG GCAAACGGTG TTTTGGGTAG GTGGTGTGGT GCCGTTGATT
CTGGTGCCGC TATTAATGCG CTGGCTGCCG GAGTCAGCGG TTTTCGCTGG CGAAAAACAG
GCTGCGCCAC CACTGCGTGC CTTATTTGCG CCAGAAACGG CAACCGCGAC GCTGCTGCTG
TGGTTGTGTT ATTTCTTCAC TCTGCTGGTG GTTTATATGT TGATCAACTG GCTACCGCTA
CTTTTGGTGG AGCAAGGATT CCAGCCATCG CAGGCGGCAG GGGTGATGTT TGCCCTGCAA
ATGGGGGCGG CAAGCGGGAC GTTAATGTTG GGCGCATTGA TGGATAAGCT GCGTCCAGTA
ACCATGTCGC TACTGATTTA TAGCGGCATG TTAGCTTCGC TGCTGGCGCT TGGAACGGTG
TCGTCATTTA ACGGTATGTT GCTGGCGGGA TTTGTCGCGG GGTTGTTTGC GACAGGTGGG
CAAAGCGTTT TGTATGCCCT GGCACCGTTG TTTTACAGTT CGCAGATCCG CGCAACAGGT
GTGGGAACAG CCGTGGCGGT AGGGCGTCTG GGGGCTATGA GCGGTCCGTT ACTGGCCGGG
AAAATGCTGG CATTAGGCAC TGGCACGGTC GGCGTAATGG CCGCTTCTGC ACCGGGTATT
CTTGTTGCTG GGTTGGCGGT GTTTATTTTG ATGAGCCGGA GATCAAGAAT GCAGCCGTGT
GCCGATGCCT GA
 
Protein sequence
MSTRTPSSSS SRLMLTIGLC FLVALMEGLD LQAAGIAAGG IAQAFALDKM QMGWIFSAGI 
LGLLPGALVG GMLADRYGRK RILIGSVALF GLFSLATAIA WDFPSLVFAR LMTGVGLGAA
LPNLIALTSE AAGPRFRGTA VSLMYCGVPI GAALAATLGF AGANLAWQTV FWVGGVVPLI
LVPLLMRWLP ESAVFAGEKQ AAPPLRALFA PETATATLLL WLCYFFTLLV VYMLINWLPL
LLVEQGFQPS QAAGVMFALQ MGAASGTLML GALMDKLRPV TMSLLIYSGM LASLLALGTV
SSFNGMLLAG FVAGLFATGG QSVLYALAPL FYSSQIRATG VGTAVAVGRL GAMSGPLLAG
KMLALGTGTV GVMAASAPGI LVAGLAVFIL MSRRSRMQPC ADA