Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0397 |
Symbol | prpB |
ID | 5591598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 414673 |
End bp | 415563 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640919582 |
Product | 2-methylisocitrate lyase |
Protein accession | YP_001457167 |
Protein GI | 157159849 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTAC ACTCTCCAGG TAAAGCGTTT CGCGCTGCAC TGTCTAAAGA AAATCCATTG CAGATTGTTG GCACCATCAA CGCTAATCAT GCGCTGTTGG CGCAGCGTGC CGGATATCAG GCAATTTATC TCTCCGGCGG TGGCGTGGCG GCAGGTTCGC TGGGGCTGCC CGATCTCGGT ATTTCTACCC TTGATGATGT GCTGACCGAC ATTCGCCGTA TCACCGACGT TTGTTCGCTG CCGCTGCTGG TGGATGCGGA TATCGGTTTT GGTTCTTCGG CCTTTAACGT GGCGCGTACG GTGAAATCGA TGATTAAAGC CGGTGCGGCA GGATTGCATA TTGAAGATCA GGTTGGTGCG AAACGCTGCG GTCATCGCCC GAACAAAGCG ATCGTCTCGA AAGAGGAGAT GGTGGATCGG ATCCGCGCGG CGGTGGATGC GAAAACCGAT CCTGATTTTG TGATCATGGC GCGCACCGAT GCGCTGGCGG TAGAGGGGCT GGATGCGGCG ATCGAGCGTG CACAGGCCTA TGTTGAAGCG GGTGCCGAGA TGTTGTTCCC GGAGGCGATT ACCGAACTCG CCATGTACCG CCAGTTTGCC GATGCGGTTC AGGTGCCAAT CCTCGCCAAC ATTACCGAAT TTGGTGCCAC GCCGCTGTTT ACCACCGACG AATTACGCAG CGCCCATGTC GCAATGGCGC TGTACCCGCT TTCAGCGTTC CGCGCCATGA ACCGCGCCGC TGAACATGTC TACAACGTCC TGCGCCAGGA AGGCACGCAG AAAAGCGTCA TCGACACCAT GCAGACCCGC AACGAACTGT ACGAAAGCAT CAACTACTAC CAGTACGAAG AGAAGCTCGA CGACCTGTTT GCCCGTAGCC AGGTGAAATA A
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Protein sequence | MSLHSPGKAF RAALSKENPL QIVGTINANH ALLAQRAGYQ AIYLSGGGVA AGSLGLPDLG ISTLDDVLTD IRRITDVCSL PLLVDADIGF GSSAFNVART VKSMIKAGAA GLHIEDQVGA KRCGHRPNKA IVSKEEMVDR IRAAVDAKTD PDFVIMARTD ALAVEGLDAA IERAQAYVEA GAEMLFPEAI TELAMYRQFA DAVQVPILAN ITEFGATPLF TTDELRSAHV AMALYPLSAF RAMNRAAEHV YNVLRQEGTQ KSVIDTMQTR NELYESINYY QYEEKLDDLF ARSQVK
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