Gene EcHS_A0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0394 
Symbol 
ID5593738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp411654 
End bp412322 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content49% 
IMG OID640919579 
Productputative homoserine/threonine efflux protein 
Protein accessionYP_001457164 
Protein GI157159846 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAC TTCACTTATT TATGGATGAA ATCACTATGG ATCCTTTGCA CGCCGTTTAC 
CTGACCGTAG GACTGTTCGT GATTACTTTT TTTAATCCGG GAGCCAATCT CTTTGTGGTA
GTACAAACCA GCCTGGCTTC CGGTCGACGC GCAGGTGTGC TGACCGGGCT GGGGGTGGCG
CTGGGCGATG CATTTTATTC CGGGTTGGGT TTGTTTGGTC TTGCAACACT AATTACGCAG
TGTGAGGAGA TTTTTTCGCT TATCAGAATC GTCGGCGGCG CTTATCTCTT ATGGTTTGCG
TGGTGCAGCA TGCGCCGCCA GTCAACACCG CAAATGAGCA CACTACAACA ACCGATTAGC
GCCCCCTGGT ATGTCTTTTT TCGCCGCGGA TTAATTACCG ATCTCTCTAA CCCGCAAACC
GTTTTATTTT TTATCAGTAT TTTCTCAGTA ACATTAAATG CCGAAACACC AACATGGGCA
CGTTTAATGG CCTGGGCGGG GATTGTGCTC GCATCAGTTA TCTGGCGAGT CTTTCTTAGT
CAGGCGTTTT CTTTGCCCGC TGTGCGTCGT GCTTATGGGC GTATGCAACG CGTTGCCAGT
CGGGTTATTG GTGCAATTAT TGGTGTATTC GCGCTACGCC TGATTTACGA AGGGGTGACG
CAGCGGTGA
 
Protein sequence
MKLLHLFMDE ITMDPLHAVY LTVGLFVITF FNPGANLFVV VQTSLASGRR AGVLTGLGVA 
LGDAFYSGLG LFGLATLITQ CEEIFSLIRI VGGAYLLWFA WCSMRRQSTP QMSTLQQPIS
APWYVFFRRG LITDLSNPQT VLFFISIFSV TLNAETPTWA RLMAWAGIVL ASVIWRVFLS
QAFSLPAVRR AYGRMQRVAS RVIGAIIGVF ALRLIYEGVT QR