| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0371 |
|---|
| Symbol | betB |
|---|
| ID | 5592816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 384601 |
|---|
| End bp | 386073 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640919556 |
|---|
| Product | betaine aldehyde dehydrogenase |
|---|
| Protein accession | YP_001457142 |
|---|
| Protein GI | 157159824 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAA TGGCAGAACA GCAGCTTTAT ATACATGGTG GTTATACCTC CGCCACCAGC
GGTCGCACCT TCGAGACCAT TAACCCGGCC AACGGTAACG TGCTGGCGAC CGTGCAGGCC
GCCGGGCGTG AGGATGTCGA TCGCGCCGTG AAGAGTGCCC AACAGGGGCA AAAAATCTGG
GCGGCGATGA CCGCTATGGA GCGCTCGCGT ATTCTGCGTC GGGCCGTTGA TATTCTGCGT
GAACGCAATG ACGAACTCGC AAAACTGGAA ACCCTCGATA CCGGAAAAGC ATATTCGGAA
ACCTCAACCG TCGATATCGT TACCGGTGCG GACGTGCTGG AGTACTACGC CGGGCTGATC
CCGGCGCTGG AAGGCAGCCA GATCCCGTTG CGTGAGACGT CATTTGTTTA TACCCGCCGC
GAACCGCTGG GTGTGGTGGC GGGGATTGGC GCATGGAACT ACCCGATTCA GATTGCCCTG
TGGAAATCCG CCCCGGCGCT GGCGGCAGGC AACGCAATGA TTTTCAAACC GAGCGAAGTC
ACCCCGCTTA CCGCGTTAAA GCTGGCTGAA ATTTACAGCG AAGCGGGCCT GCCGGACGGC
GTATTTAACG TGTTGCCGGG GGTGGGCGCG GAGACCGGGC AATATCTGAC CGAGCATCCG
GGCATTGCCA AAGTGTCATT TACCGGCGGT GTCGCCAGCG GCAAAAAAGT GATGGCTAAC
TCGGCGGCCT CTTCCCTGAA AGAAGTGACC ATGGAACTGG GCGGTAAATC ACCGCTGATC
GTTTTCGATG ATGCGGATCT CGATCTCGCC GCCGATATCG CCATGATGGC GAACTTCTTC
AGCTCCGGTC AGGTGTGTAC CAATGGCACC CGCGTCTTCG TTCCGGCGAA ATGCAAAGCC
GCATTTGAAC AAAAGATTCT GGCGCGCGTT GAGCGCATTC GCGCGGGCGA CGTTTTCGAT
CCGCAAACCA ATTTCGGCCC GCTGGTCAGC TTCCCGCATC GCGATAACGT GCTGCGCTAT
ATCGCCAAAG GCCAAGAGGA AGGCGCGCGC GTACTGTGCG GCGGCGATGT ACTGAAAGGC
GATGGCTTCG ATAACGGCGC ATGGGTGGCA CCGACCGTGT TCACCGATTG CCGCGACGAT
ATGACCATTG TGCGTGAAGA GATCTTCGGG CCGGTGATGT CCATTCTGAC CTACGAGACG
GAAGACGAAG TCATTCGCCG CGCCAATGAT ACCGACTATG GTCTGGCGGC GGGTATCGTG
ACGGCGGACC TGAACCGCGC GCATCGCGTC ATTCATCAGC TGGAAGCGGG TATTTGCTGG
ATCAATACCT GGGGTGAATC CCCGGCAGAG ATGCCCGTTG GCGGCTACAA ACACTCCGGC
ATTGGTCGCG AGAACGGCGT GATGACGCTC CAGAGTTACA CCCAGGTGAA GTCCATCCAG
GTTGAGATGG CTAAATTCCA GTCCATATTC TAA
|
|---|
| Protein sequence | MSRMAEQQLY IHGGYTSATS GRTFETINPA NGNVLATVQA AGREDVDRAV KSAQQGQKIW
AAMTAMERSR ILRRAVDILR ERNDELAKLE TLDTGKAYSE TSTVDIVTGA DVLEYYAGLI
PALEGSQIPL RETSFVYTRR EPLGVVAGIG AWNYPIQIAL WKSAPALAAG NAMIFKPSEV
TPLTALKLAE IYSEAGLPDG VFNVLPGVGA ETGQYLTEHP GIAKVSFTGG VASGKKVMAN
SAASSLKEVT MELGGKSPLI VFDDADLDLA ADIAMMANFF SSGQVCTNGT RVFVPAKCKA
AFEQKILARV ERIRAGDVFD PQTNFGPLVS FPHRDNVLRY IAKGQEEGAR VLCGGDVLKG
DGFDNGAWVA PTVFTDCRDD MTIVREEIFG PVMSILTYET EDEVIRRAND TDYGLAAGIV
TADLNRAHRV IHQLEAGICW INTWGESPAE MPVGGYKHSG IGRENGVMTL QSYTQVKSIQ
VEMAKFQSIF
|
|---|
| |