| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0370 |
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| Symbol | betA |
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| ID | 5592815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 382917 |
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| End bp | 384587 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640919555 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001457141 |
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| Protein GI | 157159823 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAATTTG ACTACATCAT TATTGGTGCC GGCTCAGCCG GCAACGTTCT CGCTACCCGT
CTGACTGAAG ATCCGAATAC CTCCGTGCTG CTGCTTGAAG CGGGCGGCCC GGACTATCGC
TTTGACTTCC GCACCCAGAT GCCCGCAGCG CTGGCGTTCC CACTACAGGG CAAACGCTAC
AACTGGGCCT ATGAAACAGA GCCTGAACCG TTTATGAATA ACCGCCGCAT GGAGTGCGGA
CGCGGTAAAG GCCTGGGTGG ATCGTCGCTG ATCAACGGCA TGTGCTACAT CCGTGGCAAT
GCGCTGGATC TCGATAACTG GGCGCAAGAA CCCGGTCTGG AGAACTGGAG TTATCTCGAC
TGCCTGCCCT ACTACCGCAA GGCCGAGACT CGCGATGTGG GCGAGAACGA CTACCACGGT
GGCGATGGCC CGGTGAGCGT CACCACCTCC AAACCCGGCG TCAATCCGCT GTTTGAAGCG
ATGATTGAAG CGGGCGTGCA GGCAGGCTAC CCGCGCACGG ACGATCTCAA CGGCTATCAG
CAGGAAGGTT TTGGCCCGAT GGATCGCACC GTCACGCCGC AGGGCCGTCG CGCCAGTACC
GCGCGCGGTT ATCTCGATCA GGCCAAATCG CGCCCTAACC TGACCATTCG TACTCACGCT
ATGACCGATC ACATCATTTT TGACGGCAAA CGCGCGGTGG GCGTCGAATG GCTGGAAGGC
GACAGCACCA TCCCAACCCG CGCAACGGCC AACAAAGAAG TGCTGTTATG TGCAGGCGCG
ATTGCCTCAC CGCAGATCCT GCAACGCTCC GGCGTCGGCA ACGCTGAACT GCTGGCGGAG
TTTGATATTC CGCTGGTGCA TGAATTACCC GGCGTCGGCG AAAATCTTCA GGATCATCTG
GAGATGTATC TGCAATATGA GTGCAAAGAA CCGGTTTCCC TCTACCCTGC CCTGCAGTGG
TGGAACCAAC CGAAAATCGG TGCGGAGTGG CTGTTTGGCG GCACTGGCGT TGGTGCCAGC
AACCACTTTG AAGCAGGTGG ATTTATTCGC AGCCGTGAGG AATTTGCGTG GCCGAATATT
CAGTACCATT TCCTGCCAGT AGCGATTAAC TATAACGGCT CGAATGCAGT GAAAGAGCAC
GGTTTCCAGT GCCACGTCGG CTCAATGCGC TCGCCAAGCC GTGGGCATGT GCGGATTAAA
TCCCGCGACC CGCACCAGCA TCCGGCGATT CTGTTTAACT ACATGTCGCA CGAGCAGGAC
TGGCAGGAGT TCCGCGACGC AATTCGCATC ACCCGGGAGA TCATGCATCA ACCGGCGCTG
GATCAGTATC GTGGCCGCGA AATCAGCCCC GGCACGGAAT GTCAGACGGA TGAACAGCTC
GATGAGTTCG TGCGTAATCA CGCCGAAACC GCCTTCCATC CGTGCGGTAC CTGCAAAATG
GGCTACGACG AGATGTCCGT GGTTGACGGC GAAGGCCGCG TACACGGGTT AGAAGGCCTG
CGTGTGGTGG ATGCGTCGAT TATGCCGCAG ATTATCACCG GGAATTTGAA CGCCACGACA
ATTATGATTG GCGAGAAAAT AGCGGATATG ATTCGTGGAC AGGAAGCGCT GCCGAGGAGC
ACGGCGGGAT ATTTTGTGGC AAATGGGATG CCGGTGAGAG CGAAAAAATG A
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| Protein sequence | MQFDYIIIGA GSAGNVLATR LTEDPNTSVL LLEAGGPDYR FDFRTQMPAA LAFPLQGKRY
NWAYETEPEP FMNNRRMECG RGKGLGGSSL INGMCYIRGN ALDLDNWAQE PGLENWSYLD
CLPYYRKAET RDVGENDYHG GDGPVSVTTS KPGVNPLFEA MIEAGVQAGY PRTDDLNGYQ
QEGFGPMDRT VTPQGRRAST ARGYLDQAKS RPNLTIRTHA MTDHIIFDGK RAVGVEWLEG
DSTIPTRATA NKEVLLCAGA IASPQILQRS GVGNAELLAE FDIPLVHELP GVGENLQDHL
EMYLQYECKE PVSLYPALQW WNQPKIGAEW LFGGTGVGAS NHFEAGGFIR SREEFAWPNI
QYHFLPVAIN YNGSNAVKEH GFQCHVGSMR SPSRGHVRIK SRDPHQHPAI LFNYMSHEQD
WQEFRDAIRI TREIMHQPAL DQYRGREISP GTECQTDEQL DEFVRNHAET AFHPCGTCKM
GYDEMSVVDG EGRVHGLEGL RVVDASIMPQ IITGNLNATT IMIGEKIADM IRGQEALPRS
TAGYFVANGM PVRAKK
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