| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0358 |
|---|
| Symbol | |
|---|
| ID | 5593344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 370824 |
|---|
| End bp | 371678 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640919543 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001457129 |
|---|
| Protein GI | 157159811 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.443979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCCC TTAGCCGTTT GTTGATGCTT AACGCTCCAC AAGGAACGAT CGATAAGAAT
TGCGTGTTAG GAAGTGACTG GCAGCTTCCA CATGGTGCCG GGGAATTATC GGTTATTCGT
TGGCATGCGT TAACGCAAGG AGCGGCGAAG CTGGAAATGC CGACGGGAGA GATTTTTACA
TTACGCCCGG GAAATGTGGT CCTGCTACCA CAAAATTCAG CTCATCGCCT GAGTCATGTC
GATAATGAAT CGACCTGTAT TGTCTGCGGC ACTCTTCGGT TGCAACATTC GGCGCGTTAT
TTTTTAACGT CTTTGCCGGA AACGCTGTTT TTAGCACCGG TTAACCACAG CGTGGAATAT
AACTGGCTGA GGGAGGCGAT CCCGTTTTTA CAACAGGAAT CCAGATCGGC GATGCCGGGA
GTGGATGCAC TGTGTAGCCA GATCTGCGCT ACATTCTTTA CCCTCGCGGT GCGTGAGTGG
ATTGCACAGG TTAATACAGA GAAAAACATT CTCAGTTTGC TTCTGCATCC ACGTCTTGGT
GCGGTAATAC AGCAAATGCT GGAAATGCCA GGACACGCCT GGACCGTCGA ATCGCTGGCC
AGCATCGCCC ACATGTCTCG GGCAAGTTTT GCCCAGCTTT TCCGTGATGT TTCCGGAACC
ACGCCGCTGG CTGTATTAAC AAAGTTGCGT CTACAAATAG CGGCCCAGAT GTTTTCCCGG
GAAATGCTCC CTGTTGTGGT GATCGCTGAG TCAGTAGGCT ATGCCAGTGA ATCATCTTTT
CACAAGGCGT TTGTCCGCGA GTTTGGTTGT ACTCCGGGAG AATATCGGGA AAGGGTCAGA
CAGCTTGCAC CCTGA
|
|---|
| Protein sequence | MDALSRLLML NAPQGTIDKN CVLGSDWQLP HGAGELSVIR WHALTQGAAK LEMPTGEIFT
LRPGNVVLLP QNSAHRLSHV DNESTCIVCG TLRLQHSARY FLTSLPETLF LAPVNHSVEY
NWLREAIPFL QQESRSAMPG VDALCSQICA TFFTLAVREW IAQVNTEKNI LSLLLHPRLG
AVIQQMLEMP GHAWTVESLA SIAHMSRASF AQLFRDVSGT TPLAVLTKLR LQIAAQMFSR
EMLPVVVIAE SVGYASESSF HKAFVREFGC TPGEYRERVR QLAP
|
|---|
| |