Gene EcHS_A0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0281 
Symbol 
ID5593179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp297039 
End bp297851 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content50% 
IMG OID640919467 
ProductISEhe3, transposase orfB 
Protein accessionYP_001457053 
Protein GI157159735 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGATG TTCATCCCAG TGGTTTTTAC GCCTGGCTTC AGCAGCCGCA TTCACAACGC 
CATCAGGCAG ACCTGAGACT GACAGGACAG ATTAAACAGT TCTGGCTGGA ATCGGGATGC
GTCTATGGTT ATCGCAAAAT CCATCTGGAT TTGCGTGACA GCGGGCAACA GTGCGGAGTA
AACAGAGTCT GGAGACTGAT GAAACGTGTC GGAATAAAGG CTCAGGTCGG ATACCGAAGC
CCGCGGGCAC GTAAAGGCGA GGCCAGTATC GTGTCACCCA ACAGGCTCCA GCGACAGTTC
AATCCGGATG CTCCTGATGA GCGTTGGGTA ACGGACATAA CCTACATCAG GACCCACGAA
GGCTGGCTGT ATCTTGCCGT TGTTGTTGAT CTGTTCTCAC GCAAAATTAT CGGCTGGTCC
ATGCAATCCC GGATGACAAA GGACATTGTC CTGAACGCAC TGCTGATGGC TGTATGGCGG
CGTAATCCCG AAAAACAGGT GCTGGTTCAT TCGGATCAGG GCAGTCAGTA CACAAGCCAT
GAGTGGCAGT CGTTCCTGAA ATCACACGGC CTGGAGGGTA GCATGAGCCG TCGCGGTAAC
TGCCATGATA ATGCGGTTGC AGAAAGTTTT TTCCAGTTGT TGAAACGTGA ACGGATAAAG
AAAAAGATCT ACGGAACGCG GGAAGAAGCC CGCAGTGATA TTTTTGATTA CATCGAAATG
TTTTATAACA GTAAGCGTCG GCATGGTTCT AGCGAACAGA TGTCACCGAC AGAATATGAA
AACCAGTATT ATCAACGGCT CGGAAGTGTC TAG
 
Protein sequence
MLDVHPSGFY AWLQQPHSQR HQADLRLTGQ IKQFWLESGC VYGYRKIHLD LRDSGQQCGV 
NRVWRLMKRV GIKAQVGYRS PRARKGEASI VSPNRLQRQF NPDAPDERWV TDITYIRTHE
GWLYLAVVVD LFSRKIIGWS MQSRMTKDIV LNALLMAVWR RNPEKQVLVH SDQGSQYTSH
EWQSFLKSHG LEGSMSRRGN CHDNAVAESF FQLLKRERIK KKIYGTREEA RSDIFDYIEM
FYNSKRRHGS SEQMSPTEYE NQYYQRLGSV