Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0255 |
Symbol | |
ID | 5594356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 276210 |
End bp | 277019 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640919441 |
Product | NlpC/P60 family protein |
Protein accession | YP_001457028 |
Protein GI | 157159710 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 68 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCAGGT ACGGGCCGGG ATACACTGCA ACATCAATGC ATGATCAGCC ATTATTGAGT ATGTCCTTGC CGTCGATTCC CTCTTTTGTG TTGTCGGGAT TACTGTTGCT TTGCTTGCCG TTTTCTTCAT TTGCCAGCGC CACCACATCA CATATCACTT TCAGCTACGC CGCCCGCCAG CGGATGCAAA ATCGTGCGCG TTTATTAAAA CAGTACCAAA CCCATCTGAA AAAACAGGCC AGCTATATTG TGGAAGGCAA TGCCGAAAGC AGAAGGGCGC TACGCCAGCA CAACCGCGAA CAGATAAAAC AGCATCCAGA ATGGTTTCCT GCGCCGCTCA AGGCGAGTGA CAGACGCTGG CAGGCGCTGG CGGAAAACAA CCATTTCTTA AGCAGCGACC ATCTGCATAA CATCACCGAA GTGGCGATTC ACCGTCTGGA GCAACAGCTT GGCAAGCCTT ACGTCTGGGG CGGTACGCGG CCCGATCAAG GCTTCGACTG TAGCGGGTTA GTTTTTTATG CCTACAACAA GATCCTTGAG GCGAAACTCC CACGCACGGC TAATGAGATG TATCACTATC GCCGGGCAAC CATTGTGGCG AATAACGACC TGCGCCGGGG AGATTTGCTA TTTTTCCATA TCCACAGCCG CGAGATTGCC GACCATATGG GGGTGTATCT GGGCGACGGT CAGTTTATTG AGTCACCGCG CACCGGGGAA ACCATTCGGG TAAGTCAGTT AGCTGAACCT TTCTGGCAGG ATCACTTTTT AGGCGCGCGG CGGATTTTGA CGGAGGAGAC GATTTTGTAA
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Protein sequence | MFRYGPGYTA TSMHDQPLLS MSLPSIPSFV LSGLLLLCLP FSSFASATTS HITFSYAARQ RMQNRARLLK QYQTHLKKQA SYIVEGNAES RRALRQHNRE QIKQHPEWFP APLKASDRRW QALAENNHFL SSDHLHNITE VAIHRLEQQL GKPYVWGGTR PDQGFDCSGL VFYAYNKILE AKLPRTANEM YHYRRATIVA NNDLRRGDLL FFHIHSREIA DHMGVYLGDG QFIESPRTGE TIRVSQLAEP FWQDHFLGAR RILTEETIL
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