Gene EcHS_A0241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0241 
Symbol 
ID5592166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp259879 
End bp260397 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content54% 
IMG OID640919428 
Producthypothetical protein 
Protein accessionYP_001457015 
Protein GI157159697 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACAC CGTGTTATAT CTCCATCACT GGTCAGACCC AGGGAAATAT TACTGCAGGT 
GCATTTACCG CTGATTCTGT CGGCAACATC TATGTGCAGG GGCACGAAGA CGAGATGCTG
GTGCAGGAAT TCCTGCATAA CGTTACTGTC CCGACCGATC CTCAGTCCGG TCAGCCTGCG
GGTCAGCGTG CTCACAAGCC TTTCATTTTT ACCGTGGCGC TGAACAAAGC GGTTCCGCTG
ATGTACAACG CACTGGCCTC CGGCGAAATG CTGCCAACCA CTGAACTTCA CTGGTGGCGT
ACCTCTGTGG AAGGCAAACA GGAGCATTAT TTCACTACCC GCCTGACTGA TTCGACGATT
GTCGATATGA AACTGCATAT GCCGCATTGC CAGGACCCGG CGAAACGCGA GTTCACCCAG
TTGCTCGAAG TTTCACTGGC CTACCGCAAA ATTGAATGGG AACACGTCAA ATCTGGCACC
TCCGGTGCCG ACGACTGGCG CGCACCGCTG GAAGCATAA
 
Protein sequence
MPTPCYISIT GQTQGNITAG AFTADSVGNI YVQGHEDEML VQEFLHNVTV PTDPQSGQPA 
GQRAHKPFIF TVALNKAVPL MYNALASGEM LPTTELHWWR TSVEGKQEHY FTTRLTDSTI
VDMKLHMPHC QDPAKREFTQ LLEVSLAYRK IEWEHVKSGT SGADDWRAPL EA