| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0237 |
|---|
| Symbol | |
|---|
| ID | 5595040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 256897 |
|---|
| End bp | 258372 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640919424 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001457011 |
|---|
| Protein GI | 157159693 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 68 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTAC AGGAAGAGGA ACTCGTTTCC AGTCATGCCG GGCAGCCTGA GCAGGCATCG
TCGCTGCTTG ATCAAATCAT GGCACAGACC CGTATTCAGC CCGGTTCGGA AGGTTATGAC
GTTGCCCGCC AGGGTGTGAC AGCCTTTATT GCCAGCATCC TGCAATCCAC TGCATCTGCC
GAACCGGTCA ATAAACTGGC CGTGGACAGC ATGATTGCAG ATATTGATGA ACGCATCAGC
CGCCAGATGG ATGTCATCAT CCATGCGCCT GCCTTTCAGC AGGTCGAATC GTTCTGGCGC
TCACTGAAAA CCATGGTGGA TCGCGTTGAT TTCCGTGAAA ACATCAAGGT CAACGTGCTT
CATGTCACCA AGCAGGAACT TCTGGAAGAC TTTGAGTTTG CGCCAGAAAT TATTCAGTCC
GGATTTTATA AGCACGTTTA TTCGTCCGGT TTCGGACAGT TTGGCGGTGA ACCCATCGCT
GCCGTGCTGG GCGCTTATGA GTTCAAAAAT ACCGCGCCTG ACATGAAACT GCTGCAATAC
GTCAGTGCCG TGGGCGCAAT GGCGCACGCA CCGTTCCTGT CCTCCGTTTC CCCGGAGTTT
ATGGGGCTGA ACTCGTGGAC CGAACTGCCT AATATCAAAG ATCTTTATGC CATCTTTGAA
GGTCCGGCCT ACACCAAATG GCGCGCCCTG CGTGACTCGG AAGATTCGCG CTATTTAGGG
CTTACGGCAC CCCGCTTCCT GCTTCGCCAG CCCTATTCAC CAACAGATAA CCCTGTTAAG
AACTTTAACT ATTACGAAGA TGTCAGCCAG AACCACGAAG ATTATCTGTG GGGTAATACG
GCCTGGATGC TGGCATGCAA TATCGCAGAC AGTTTTGCCA AATACCGCTG GTGTCCAAAC
ATTATCGGTC CGCAAAGCGG CGGCGCAGTG AAAGATCTGC CGGTGCATCT GTTCGAAACG
ATGGGGCAGA TTCAGGCCAA AATCCCAACC GAGGTGCTGG TCACCGATCG CCGCGAATTT
GAACTGGCTG AAGAGGGTTT TATCACCCTT ACCATGCGTA AAGACTCTGA TAATGCAGCC
TTTTTCTCTG CAAACTCGGT ACAAAAACCG AAGCACTTTC CGGGAAAAGA TGCAGAAACC
AACTATAAGC TGGGTACGCA GCTTCCTTAT CTCTTCATCA TCAATCGGTT AGCGCACTAC
ATCAAGGTGT TGCAGCGTGA ACAACTGGGG TCATGGAAAG AAAGGAGCGA CTTAGAAAGA
GAGCTTAATA CCTGGATCCG TCAGTATGTT GCCGACCAGG AAAACCCGCC TGCAGACGTG
CGCAGCCGCA AACCTCTGCG CGCTGCCAAA GTTGAGGTTA TGGATGTAGA AGGCGAACCC
GGCTGGTACC AGGTTGCGCT AAGCGTGAGG CCTCATTTTA AATTTATGGG GGCAAATTTT
GAGCTTTCCC TGGTTGGCCG GTTAGACAGG GAGTAA
|
|---|
| Protein sequence | MSLQEEELVS SHAGQPEQAS SLLDQIMAQT RIQPGSEGYD VARQGVTAFI ASILQSTASA
EPVNKLAVDS MIADIDERIS RQMDVIIHAP AFQQVESFWR SLKTMVDRVD FRENIKVNVL
HVTKQELLED FEFAPEIIQS GFYKHVYSSG FGQFGGEPIA AVLGAYEFKN TAPDMKLLQY
VSAVGAMAHA PFLSSVSPEF MGLNSWTELP NIKDLYAIFE GPAYTKWRAL RDSEDSRYLG
LTAPRFLLRQ PYSPTDNPVK NFNYYEDVSQ NHEDYLWGNT AWMLACNIAD SFAKYRWCPN
IIGPQSGGAV KDLPVHLFET MGQIQAKIPT EVLVTDRREF ELAEEGFITL TMRKDSDNAA
FFSANSVQKP KHFPGKDAET NYKLGTQLPY LFIINRLAHY IKVLQREQLG SWKERSDLER
ELNTWIRQYV ADQENPPADV RSRKPLRAAK VEVMDVEGEP GWYQVALSVR PHFKFMGANF
ELSLVGRLDR E
|
|---|
| |