| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0236 |
|---|
| Symbol | |
|---|
| ID | 5595039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 256477 |
|---|
| End bp | 256890 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640919423 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001457010 |
|---|
| Protein GI | 157159692 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 75 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACCGG ATCGGGAAAG AACCACAGGT TCTCTTTTTG AGCGTATGGA AGCCTCTTCG
GCCAGAAACC GGCAGGGAGG CAGTATTCAT TCGCTCAGGC AATCCATTCG CCAGAACCTA
CGAAACATTC TTAATACCCG GTCCGGTAGT TGCCGGGGTG CGCCTGAGCT GGGCATTGAT
GAACCGGAAG GGGCTGAAAA CTTCCGCGAA TCCATGAGTC GGGCCATCGA GCAATGTATA
GAACGCTATG AACCCCGGAT CTCACACGCT GAAGTGCAGG CAGTGGTTTC ATCCGCCTCC
AGCCCGCTGG ATATGACGTT TCATATTACA GCCTGGGTGA CATTTAACGA AACGCATGAG
GTGCTTGAAT TTGATATGGC ACCGAATGGC AGCCAGCATT ACCGGGTGGA CTGA
|
|---|
| Protein sequence | MIPDRERTTG SLFERMEASS ARNRQGGSIH SLRQSIRQNL RNILNTRSGS CRGAPELGID
EPEGAENFRE SMSRAIEQCI ERYEPRISHA EVQAVVSSAS SPLDMTFHIT AWVTFNETHE
VLEFDMAPNG SQHYRVD
|
|---|
| |