Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0212 |
Symbol | |
ID | 5594779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 229345 |
End bp | 230259 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640919399 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001456987 |
Protein GI | 157159669 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.00206756 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCCA CGTCGGAAGA ACTCGCCATT TTTGTTTCGG TCGTCGAAAG CGGCAGCTTT AGCCGGGCAG CGGAACAATT AGGGCAAGCA AACTCAGCGG TAAGCCGGGC AGTGAAAAAG CTGGAGATGA AACTTGGCGT TAGCCTGCTT AATCGGACCA CGCGACAACT TAGCCTGACG GAAGAAGGCG AGCGTTATTT TCGTCGCGTA CAGTCAATTT TGCAGGAGAT GGCAGCGGCA GAATCAGAAA TTATGGAGAC GCGTAATACA CCGCGTGGAC TGTTGCGCAT CGATGCCGCA ACTCCAGTGG TGCTGCACTT TCTGATGCCG TTGATTAAGC CTTTCCGTGA ACGCTATCCG GAAGTCACTT TGTCGCTAGT CTCCTCCGAA ACGATTATTA ATTTGATCGA AAGAAAAGTT GATGTCGCGA TACGCGCCGG TACGTTAACG GATTCCAGCT TACGTGCCAG GCCGTTATTT AATAGTTATC GAAAAATTAT CGCCTCCCCC GATTATATTT CCCGCTACGG GAAGCCAGAA ACGATCGACG ATTTAAAGCA ACATGTTTGC CTGGGATTCA CTGAACCCGC TTCCCTCAAT ACCTGGCCGA TAGCCTGTAG TGATGGACAA TTACATGAGG TGAAGTACGG TTTGTCATCC AATAGTGGGG AAACACTGAA ACAGCTTTGC CTGAGTGGCA ACGGGATTGC GTGTTTGTCC GACTACATGA TCGACAAAGA AATCGCTCGC GGAGAATTGG TGGAGTTAAT GGCAGATAAA GTGTTGCCAG TGGCAATGCC ATTCAGTGCA GTCTATTACA GCGACCGTGC GGTAAGTACG CGCATCCGGG CTTTTATCGA TTTCCTTAGC GAGCATGTAA AAACAGCTCC CGGAGGAGCT GTCAGAGAGG CTTAA
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Protein sequence | MKATSEELAI FVSVVESGSF SRAAEQLGQA NSAVSRAVKK LEMKLGVSLL NRTTRQLSLT EEGERYFRRV QSILQEMAAA ESEIMETRNT PRGLLRIDAA TPVVLHFLMP LIKPFRERYP EVTLSLVSSE TIINLIERKV DVAIRAGTLT DSSLRARPLF NSYRKIIASP DYISRYGKPE TIDDLKQHVC LGFTEPASLN TWPIACSDGQ LHEVKYGLSS NSGETLKQLC LSGNGIACLS DYMIDKEIAR GELVELMADK VLPVAMPFSA VYYSDRAVST RIRAFIDFLS EHVKTAPGGA VREA
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