Gene EcHS_A0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0176 
SymboluppS 
ID5591020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp193063 
End bp193821 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content50% 
IMG OID640919363 
Productundecaprenyl pyrophosphate synthase 
Protein accessionYP_001456957 
Protein GI157159639 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000000145579 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTCTG CTACTCAACC ACTTAGCGAA AAATTGCCAG CGCATGGCTG CCGTCATGTT 
GCGATCATTA TGGACGGCAA TGGTCGCTGG GCAAAAAAGC AAGGGAAGAT TCGTGCCTTT
GGGCATAAAG CCGGGGCAAA ATCCGTCCGC CGGGCTGTCT CTTTTGCGGC CAACAACGGT
ATTGAGGCGT TAACGCTGTA TGCCTTTAGT AGTGAAAACT GGAACCGACC AGCGCAGGAA
GTCAGTGCGT TAATGGAACT GTTTGTGTGG GCGCTCGATA GCGAAGTAAA AAGTCTGCAC
CGACATAACG TGCGTCTGCG TATTATTGGC GATACCAGTC GCTTTAACTC GCGTTTGCAA
GAACGTATTC GTAAATCTGA AGCGCTAACA GCCGGGAATA CCGGTCTGAC GCTGAATATT
GCGGCGAACT ACGGTGGACG TTGGGATATA GTCCAGGGAG TCAGGCAACT GGCTGAAAAG
GTGCAGCAAG GAAACCTGCA ACCAGATCAG ATAGATGAAG AGATGCTAAA CCAGCATGTC
TGTATGCATG AACTGGCCCC TGTAGATTTA GTAATTAGGA CTGGGGGGGA GCATCGCATT
AGTAACTTTT TGCTTTGGCA AATTGCCTAT GCCGAACTTT ACTTTACAGA TGTTCTCTGG
CCCGATTTCG ATGAACAAGA CTTTGAAGGG GCGTTAAATG CCTTTGCTAA TCGAGAGCGT
CGTTTCGGCG GCACCGAGCC CGGTGATGAA ACAGCCTGA
 
Protein sequence
MLSATQPLSE KLPAHGCRHV AIIMDGNGRW AKKQGKIRAF GHKAGAKSVR RAVSFAANNG 
IEALTLYAFS SENWNRPAQE VSALMELFVW ALDSEVKSLH RHNVRLRIIG DTSRFNSRLQ
ERIRKSEALT AGNTGLTLNI AANYGGRWDI VQGVRQLAEK VQQGNLQPDQ IDEEMLNQHV
CMHELAPVDL VIRTGGEHRI SNFLLWQIAY AELYFTDVLW PDFDEQDFEG ALNAFANRER
RFGGTEPGDE TA