Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0176 |
Symbol | uppS |
ID | 5591020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 193063 |
End bp | 193821 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640919363 |
Product | undecaprenyl pyrophosphate synthase |
Protein accession | YP_001456957 |
Protein GI | 157159639 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000000145579 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTCTG CTACTCAACC ACTTAGCGAA AAATTGCCAG CGCATGGCTG CCGTCATGTT GCGATCATTA TGGACGGCAA TGGTCGCTGG GCAAAAAAGC AAGGGAAGAT TCGTGCCTTT GGGCATAAAG CCGGGGCAAA ATCCGTCCGC CGGGCTGTCT CTTTTGCGGC CAACAACGGT ATTGAGGCGT TAACGCTGTA TGCCTTTAGT AGTGAAAACT GGAACCGACC AGCGCAGGAA GTCAGTGCGT TAATGGAACT GTTTGTGTGG GCGCTCGATA GCGAAGTAAA AAGTCTGCAC CGACATAACG TGCGTCTGCG TATTATTGGC GATACCAGTC GCTTTAACTC GCGTTTGCAA GAACGTATTC GTAAATCTGA AGCGCTAACA GCCGGGAATA CCGGTCTGAC GCTGAATATT GCGGCGAACT ACGGTGGACG TTGGGATATA GTCCAGGGAG TCAGGCAACT GGCTGAAAAG GTGCAGCAAG GAAACCTGCA ACCAGATCAG ATAGATGAAG AGATGCTAAA CCAGCATGTC TGTATGCATG AACTGGCCCC TGTAGATTTA GTAATTAGGA CTGGGGGGGA GCATCGCATT AGTAACTTTT TGCTTTGGCA AATTGCCTAT GCCGAACTTT ACTTTACAGA TGTTCTCTGG CCCGATTTCG ATGAACAAGA CTTTGAAGGG GCGTTAAATG CCTTTGCTAA TCGAGAGCGT CGTTTCGGCG GCACCGAGCC CGGTGATGAA ACAGCCTGA
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Protein sequence | MLSATQPLSE KLPAHGCRHV AIIMDGNGRW AKKQGKIRAF GHKAGAKSVR RAVSFAANNG IEALTLYAFS SENWNRPAQE VSALMELFVW ALDSEVKSLH RHNVRLRIIG DTSRFNSRLQ ERIRKSEALT AGNTGLTLNI AANYGGRWDI VQGVRQLAEK VQQGNLQPDQ IDEEMLNQHV CMHELAPVDL VIRTGGEHRI SNFLLWQIAY AELYFTDVLW PDFDEQDFEG ALNAFANRER RFGGTEPGDE TA
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