Gene EcHS_A0175 details

Gene Information

• Locus tag: EcHS_A0175
• Symbol: dxr
• ID: 5591019
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 191679
• End bp: 192875
• Gene Length: 1197 bp
• Protein Length: 398 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640919362
• Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• Protein accession: YP_001456956
• Protein GI: 157159638
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• TIGRFAM ID: [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.000107541
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAAC TCACCATTCT GGGCTCGACC GGCTCGATTG GTTGCAGCAC GCTGGACGTG 
GTGCGCCATA ATCCCGAACA CTTCCGCGTA GTTGCGCTGG TGGCAGGCAA AAATGTCACT 
CGCATGGTAG AACAGTGCCT GGAATTCTCT CCCCGCTATG CCGTAATGGA CGATGAAGCG 
AGTGCGAAAC TTCTTAAAAC GATGCTACAG CAACAGGGTA GCCGCACCGA AGTCTTAAGT 
GGGCAACAAG CCGCTTGCGA TATGGCAGCG CTTGAGGATG TTGATCAGGT GATGGCAGCC 
ATTGTTGGCG CTGCTGGGCT GTTACCTACG CTTGCTGCGA TCCGCGCGGG TAAAACCATT 
TTGCTGGCCA ATAAAGAATC ACTGGTTACC TGCGGACGTC TGTTTATGGA CGCCGTAAAG 
CAGAGCAAAG CGCAATTGTT ACCGGTCGAT AGCGAACATA ACGCCATTTT TCAGAGTTTA 
CCGCAACCTA TCCAGCATAA TCTGGGATAC GCTGACCTTG AGCAAAATGG CGTGGTGTCC 
ATTTTACTTA CCGGGTCTGG TGGCCCTTTC CGTGAGACGC CATTGCGCGA TTTGGCAACA 
ATGACGCCGG ATCAAGCCTG CCGTCATCCG AACTGGTCGA TGGGGCGTAA AATTTCTGTC 
GATTCGGCTA CCATGATGAA CAAAGGTCTG GAATACATTG AAGCGCGTTG GCTGTTTAAC 
GCCAGCGCCA GCCAGATGGA AGTGCTGATT CACCCGCAGT CAGTGATTCA CTCAATGGTG 
CGCTATCAGG ACGGCAGTGT TCTGGCGCAG CTGGGGGAAC CGGATATGCG TACGCCAATT 
GCCCACACCA TGGCATGGCC GAATCGCGTG AACTCTGGCG TGAAGCCGCT CGATTTTTGC 
AAACTAAGTG CGTTGACATT TGCCGCACCG GATTATGATC GTTATCCATG CCTGAAACTG 
GCGATGGAGG CGTTCGAACA AGGTCAGGCA GCGACGACAG CATTGAATGC CGCAAACGAA 
ATCACCGTTG CTGCTTTTCT TGCGCAACAA ATCCGCTTTA CGGATATCGC TGCGTTGAAT 
TTATCCGTAC TGGAAAAAAT GGATATGCGC GAACCACAAT GTGTGGACGA TGTGTTATCT 
GTTGATGCGA ACGCGCGTGA AGTCGCCAGA AAAGAGGTGA TGCGTCTCGC AAGCTGA 

 

Protein sequence

MKQLTILGST GSIGCSTLDV VRHNPEHFRV VALVAGKNVT RMVEQCLEFS PRYAVMDDEA 
SAKLLKTMLQ QQGSRTEVLS GQQAACDMAA LEDVDQVMAA IVGAAGLLPT LAAIRAGKTI 
LLANKESLVT CGRLFMDAVK QSKAQLLPVD SEHNAIFQSL PQPIQHNLGY ADLEQNGVVS 
ILLTGSGGPF RETPLRDLAT MTPDQACRHP NWSMGRKISV DSATMMNKGL EYIEARWLFN 
ASASQMEVLI HPQSVIHSMV RYQDGSVLAQ LGEPDMRTPI AHTMAWPNRV NSGVKPLDFC 
KLSALTFAAP DYDRYPCLKL AMEAFEQGQA ATTALNAANE ITVAAFLAQQ IRFTDIAALN 
LSVLEKMDMR EPQCVDDVLS VDANAREVAR KEVMRLAS