Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0151 |
Symbol | hrpB |
ID | 5593465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 161153 |
End bp | 163582 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640919337 |
Product | ATP-dependent RNA helicase HrpB |
Protein accession | YP_001456932 |
Protein GI | 157159614 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0000698462 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGTCGT TGCCCGTTGC TGGCGTCTTA TCTGAATTAC TTACCGCTCT CGATTGTGCG CCGCAGGTAT TATTAAGTGC GCCGACCGGG GCCGGGAAAT CAACCTGGCT GCCGCTGCAA CTGCTGGCGC ATCCCGGCAT TAACGGGAAA ATTATCCTGC TGGAGCCGCG TCGTCTGGCG GCGCGTAACG TCGCGCAACG GCTGGCGGAG CTGCTTAACG AAAAGCCAGG CGATACCGTT GGCTACCGGA TGCGTGCGCA AAACTGCGTC GGGCCGAATA CCCGCCTGGA AGTGGTTACC GAAGGCGTGC TGACGCGCAT GATCCAGCGT GACCCGGAAC TGAGCGGTGT TGGACTGGTG ATCCTTGATG AATTTCATGA GCGCAGCTTG CAGGCGGATT TGGCGTTGGC GCTGTTACTC GATGTGCAAC AAGGTCTGCG TGATGACCTT AAACTGCTGA TTATGTCGGC TACCCTGGAC AACGACCGCT TGCAGCAAAT GCTGCCAGAA GCGCCTGTCG TCATCTCAGA AGGGCGCTCG TTTCCGGTTG AACGCCGTTA TTTACCGCTG CCCGCGCATC AGCGTTTTGA CGATGCCGTT GCGGTAGCCA CCGCTGAAAT GCTGCGTCAG GAAAGCGGAT CATTACTGTT ATTTTTACCT GGCGTCGGAG AAATTCAGCG TGTGCAGGAA CAACTGGCTT CGCGCATCGG CAGTGATGTA TTGCTCTGCC CGCTGTATGG CGCGTTGTCG CTGAACGATC AGCGAAAAGC GATCCTCCCG GCACCGCAAG GGATGCGCAA AGTGGTGCTG GCGACCAATA TTGCTGAAAC CAGTTTAACC ATTGAAGGTA TTCGTCTGGT GGTGGATTGT GCCCAGGAGC GTGTGGCGCG TTTTGATCCG CGCACGGGGC TTACGCGACT GATTACTCAA CGCGTTAGCC AGGCATCCAT GACGCAGCGT GCCGGGCGCG CCGGGCGTCT GGAGCCGGGT ATCTGCCTGC ATTTAATCGC CAAAGAACAA GCAGAACGCG CCGCGGCGCA AAGTGAACCG GAGATCTTAC AAAGCGATCT TTCCGGTTTG CTGATGGAAT TACTGCAATG GGGATGCAGC GATCCGGCGC AGATGAGCTG GCTGGATCAA CCGCCAGTAG TGAATCTACT GGCCGCGAAA CGTCTGTTAC AAATGCTGGG GGCACTGGAG GGTGAACGGC TTAGTGCGCA AGGGCAAAAA ATGGCAGCGC TGGGTAACGA TCCGCGTTTA GCGGCAATGC TGGTTAGCGC GAAGAACGAC GACGAAGCTG CTACCGCGGC AAAAATTGCC GCCATTCTCG AAGAGCCGCC ACGGATGGGC AATAGTGACC TGGGCGTGGC GTTTTCGCGC AATCAACCAG CCTGGCAGCA ACGTAGTCAG CAACTGTTAA AACGCTTAAA CGTACGCGGC GGTGAGGCAG ACAGTTCGCT TATCGCGCCG CTACTTGCCG GGGCGTTTGC CGATCGCATT GCTCGCCGCC GTGGGCAAGA TGGACGCTAT CAACTGGCAA ACGGCATGGG AGCGATGCTC GATGCCGACG ATGCGCTAAG CCGCCACGAA TGGTTGATCG CACCGTTATT ATTGCAGGGC AGCGCCTCGC CGGATGCGCG GATTTTACTG GCGCTGCCGG TCGATATTGA TGAGTTAGTA CAACGCTGCC CGCAGCTGGT ACAGCAGTCT GACACTGTGG AGTGGGATGA CGCGCAAGGT ACGCTGAAAG CCTGGCGTCG GCTGCAAATC GGTCTGCTGA CGGTGAAAGT GCAGCCGCTG GCGAAACCCT CGGAAGACGA GTTGCATCAG GCGATGCTTA ACGGCATTCG TGATAAAGGT TTAAGCATAC TCAACTGGAC GGCGGAAGCG GAACAGCTAC GCTTGCGTTT GTTATGCGCC GCAAAGTGGT TGCCGGAATA TGACTGGCCT GCGGTTGATA ATGAAAGTTT GTTGGCGACG CTGGAAACGT GGCTGCTGCC ACATATGACC GGCGTGCATT CACTACGCGG CCTGAAATCA CTCGACATTT ATCAGGCACT ACGCGGATTA CTTGATTGGG GAATGCAGCA ACGTCTGGAT AGTGAATTGC CTGCGCATTA CACTGTGCCG ACGGGAAGCC GGATCGCCAT TCGTTATCAT GAAGATAACC CGCCCGCGCT GGCGGTGAGA ATGCAGGAGA TGTTTGGTGA GGCCACTAAT CCGACGATCG CCCAGGGGCG CGTGCCGCTG GTGCTGGAGT TGCTTTCCCC TGCCCAAAGG CCATTACAAA TCACGCGTGA TTTGGGGGCC TTCTGGAAAG GGGCGTATCG TGAGGTGCAA AAGGAGATGA AAGGGCGTTA TCCCAAACAC GTCTGGCCGG ACGACCCGGC AAACACGGCA CCGACGCGAC GGACGAAAAA GTATTCGTAA
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Protein sequence | MSSLPVAGVL SELLTALDCA PQVLLSAPTG AGKSTWLPLQ LLAHPGINGK IILLEPRRLA ARNVAQRLAE LLNEKPGDTV GYRMRAQNCV GPNTRLEVVT EGVLTRMIQR DPELSGVGLV ILDEFHERSL QADLALALLL DVQQGLRDDL KLLIMSATLD NDRLQQMLPE APVVISEGRS FPVERRYLPL PAHQRFDDAV AVATAEMLRQ ESGSLLLFLP GVGEIQRVQE QLASRIGSDV LLCPLYGALS LNDQRKAILP APQGMRKVVL ATNIAETSLT IEGIRLVVDC AQERVARFDP RTGLTRLITQ RVSQASMTQR AGRAGRLEPG ICLHLIAKEQ AERAAAQSEP EILQSDLSGL LMELLQWGCS DPAQMSWLDQ PPVVNLLAAK RLLQMLGALE GERLSAQGQK MAALGNDPRL AAMLVSAKND DEAATAAKIA AILEEPPRMG NSDLGVAFSR NQPAWQQRSQ QLLKRLNVRG GEADSSLIAP LLAGAFADRI ARRRGQDGRY QLANGMGAML DADDALSRHE WLIAPLLLQG SASPDARILL ALPVDIDELV QRCPQLVQQS DTVEWDDAQG TLKAWRRLQI GLLTVKVQPL AKPSEDELHQ AMLNGIRDKG LSILNWTAEA EQLRLRLLCA AKWLPEYDWP AVDNESLLAT LETWLLPHMT GVHSLRGLKS LDIYQALRGL LDWGMQQRLD SELPAHYTVP TGSRIAIRYH EDNPPALAVR MQEMFGEATN PTIAQGRVPL VLELLSPAQR PLQITRDLGA FWKGAYREVQ KEMKGRYPKH VWPDDPANTA PTRRTKKYS
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