| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0115 |
|---|
| Symbol | ampE |
|---|
| ID | 5591693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 120920 |
|---|
| End bp | 121774 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640919302 |
|---|
| Product | regulatory protein AmpE |
|---|
| Protein accession | YP_001456897 |
|---|
| Protein GI | 157159579 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.000121424 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTAT TTACAACCTT ACTGGTGTTA ATTTTCGAGC GCCTGTTTAA GTTGGGCGAG
CACTGGCAGC TTGATCATCG TCTTGAAGCG TTCTTTCGGC GGGTGAAACA TTTTTCTCTC
GGGCGCACGT TAGGCATGAC CATTATTGCG ATGGGCGTGA CTTTTTTACT GTTACGCGCA
TTGCAGGGAG TATTGTTCAA CGTTCCCACG CTACTGGTGT GGCTGCTGAT TGGTTTGCTG
TGTATTGGCG CAGGTAAAGT TCGTCTTCAT TATCATGCTT ATCTGACAGC TGCTTCACGT
AATGATAGCC ATGCCCGTGC CACGATGGCT GGCGAACTCA CCATGATTCA CGGCGTCCCG
GCAGGCTGCG ACGAACGTGA GTATTTGCGT GAGCTGCAAA ATGCATTGCT GTGGATTAAC
TTTCGTTTTT ATCTTGCACC GCTGTTCTGG CTGATTGTGG GGGGAACCTG GGGACCCGTT
ACGCTGATGG GGTATGCGTT TTTGCGTGCA TGGCAATACT GGCTGGCGCG ATATCAGACG
CCGCATCATC GTTTACAGTC CGGCATTGAT GCCGTGCTTC ATGTACTGGA TTGGGTGCCG
GTTCGTCTTG CGGGTGTGGT ATATGCCTTG ATCGGTCATG GTGAGAAAGC GTTACCGGCC
TGGTTTGCTT CGCTGGGTGA TTTCCATACT TCGCAGTATC AGGTGTTAAC GCGTCTGGCG
CAGTTCTCTC TGGCGCGTGA ACCGCATGTC GATAAGGTGG AGACGCCGAA GGCAGCGGTT
TCAATGGCGA AGAAAACCTC GTTCGTGGTC GTGGTGGTGA TTGCACTACT GACGATTTAC
GGGGCGTTGG TGTAA
|
|---|
| Protein sequence | MTLFTTLLVL IFERLFKLGE HWQLDHRLEA FFRRVKHFSL GRTLGMTIIA MGVTFLLLRA
LQGVLFNVPT LLVWLLIGLL CIGAGKVRLH YHAYLTAASR NDSHARATMA GELTMIHGVP
AGCDEREYLR ELQNALLWIN FRFYLAPLFW LIVGGTWGPV TLMGYAFLRA WQYWLARYQT
PHHRLQSGID AVLHVLDWVP VRLAGVVYAL IGHGEKALPA WFASLGDFHT SQYQVLTRLA
QFSLAREPHV DKVETPKAAV SMAKKTSFVV VVVIALLTIY GALV
|
|---|
| |