Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0113 |
Symbol | nadC |
ID | 5591691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 119391 |
End bp | 120284 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640919300 |
Product | quinolinate phosphoribosyltransferase |
Protein accession | YP_001456895 |
Protein GI | 157159577 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0000318508 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCCTC GCCGCTATAA CCCTGACACC CGACGTGACG AGCTGCTGGA ACGCATTAAT CTCGATATCC CCGGCGCGGT GGCCCAGGCG CTGCGGGAAG ATTTAGGCGG AACAGTCGAT GTCAACAATG ATATTACGGC AAAACTTTTA CCGGAAAATT CTCGCTCTCA TGCCACGGTG ATCACCCGCG AGAATGGCGT CTTTTGCGGC AAACGCTGGG TTGAAGAGGT GTTTATTCAA CTGGCAGGCG ACGATGTCAC CATAATCTGG CATGTGGATG ACGGCGATGT CATCAATGCC AATCAATCCT TGTTCGAACT TGAAGGCCCA TCCCGCGTGC TGTTAACGGG CGAACGCACT GCGCTTAATT TTGTGCAAAC CCTTTCAGGA GTTGCCAGTA AGGTACGCCA CTATGTCGAA TTGCTGGAAG GCACCAACAC GCAGTTGTTG GATACGCGCA AAACCTTACC CGGCCTGCGT TCAGCTCTGA AATACGCGGT ACTTTGCGGC GGCGGAGCGA ATCACCGTCT GGGGCTTTCT GATGCCTTCC TGATCAAAGA AAACCATATT ATTGCCTCCG GCTCAGTGCG CCAGGCGGTC GAAAAAGCGT CCTGGCTGCA CCCGGATGCG CCAGTAGAAG TCGAAGTAGA GAATCTGGAA GAACTTGATG AAGCCCTGAA AGCAGGAGCC GATATCATCA TGCTGGATAA CTTCGAAACA GAACAGATGC GCGAAGCCGT CAAACGCACC AACGGCAAGG CGCTACTGGA AGTGTCTGGC AACGTCACTG ACAAAACACT GCGTGAATTT GCCGAAACGG GCGTGGACTT TATCTCCGTC GGTGCGCTAA CTAAACACGT ACAAGCACTC GACCTTTCAA TGCGTTTTCG CTAA
|
Protein sequence | MPPRRYNPDT RRDELLERIN LDIPGAVAQA LREDLGGTVD VNNDITAKLL PENSRSHATV ITRENGVFCG KRWVEEVFIQ LAGDDVTIIW HVDDGDVINA NQSLFELEGP SRVLLTGERT ALNFVQTLSG VASKVRHYVE LLEGTNTQLL DTRKTLPGLR SALKYAVLCG GGANHRLGLS DAFLIKENHI IASGSVRQAV EKASWLHPDA PVEVEVENLE ELDEALKAGA DIIMLDNFET EQMREAVKRT NGKALLEVSG NVTDKTLREF AETGVDFISV GALTKHVQAL DLSMRFR
|
| |