| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0111 |
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| Symbol | hofB |
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| ID | 5593055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 117353 |
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| End bp | 118738 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640919299 |
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| Product | hypothetical protein |
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| Protein accession | YP_001456894 |
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| Protein GI | 157159576 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0000253922 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTC CACAGCTCAC TGCCCTGTGT CTGCGTTATC ATGGAGTCTT GCTGGATGCC
AGCGAAGAGG TGGTTCATGT TGCGGTAGTC GATGCACCTT CGCATGAGCT ACTGGACGCA
TTGCATTTCG CTACCACCAA ACGTATTGAG ATCACCTGCT GGACGCGCCA ACAAATGGAA
GGTCACGCCA GTCGCACACA ACAGACATTG CCCGTAGCTG TTCAGGAGAA GCATCAGCCC
AAAGCAGAGT TGCTAACTCG AACGTTACAA TCTGCGCTGG AACAACGCGC GTCTGATATT
CATATCGAAC CAGCGGACAA TGCCTACCGC ATCCGCTTGC GTATCGACGG CGTATTGCAT
CCTTTACCGG ATGTTTCACC GGATGCCGGA GTCGCATTAA CCGCCAGATT AAAAGTGCTG
GGAAACCTGG ATATTGCGGA ACATCGCCTG CCGCAGGACG GGCAATTCAC TGTCGAACTG
GCAGGAAACG CCGTCTCATT TCGTATTGCG ACCTTACCAT GTCGGGGTGG TGAAAAGGTG
GTATTAAGGT TGTTACAGCA GGTGAGCCAG GCACTGGATG TCAACACGCT TGGAATGCAG
CCGTTACAAC TGGCGGACTT TGCTCATGCC TTGCAACAAC CACAGGGACT GGTGCTGGTA
ACTGGCCCTA CAGGCAGCGG CAAAACGGTC ACGCTTTATA GTGCCCTGCA AACGCTGAAT
ACCGCTGACA TTAATATTTG TAGCGTCGAA GATCCGGTTG AGATCCCCAT AGCCGGACTA
AACCAGACGC AAATCCATCC GCGTGCCGGA CTCACCTTTC AGGGCGTGTT GCGTGCGTTA
TTGCGCCAGG ATCCTGACGT CATCATGATC GGAGAGATCC GCGATGGCGA AACAGCAGAG
ATCGCTATTA AAGCGGCGCA AACTGGTCAC CTGGTGTTGT CTACCCTACA CACTAATTCC
ACCTGCGAAA CGCTGGTACG TTTACAGCAA ATGGGGGTCG CCCGCTGGAT GCTATCATCG
GCGCTTACGC TGGTAATAGC CCAGCGTCTG GTACGCAAAC TTTGCCCACA TTGTCGCCGG
CAGCAAGGGG AGCCCATCCA CATTCCAGAC AATGTATGGC CATCGCCGCT GCCCCACTGG
CAGGCACCCG GTTGTGTACA TTGCTACCAC GGTTTTTATG GTCGTACGGC CTTATTTGAA
GTTCTGCCCA TAACGCCGGT CATTCGTCAG CTTATTTCCG CTAATACCGA CGTTGAATCG
CTGGAAACGC ACGCACGACA GGCGGGTATG CGTACGCTTT TTGAAAACGG CTGCCTGGCC
GTGGAGCAAG GCTTAACCAC CTTTGAAGAG TTAATCCGCG TACTGGGGAT GCCGCATGGC
GAGTAA
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| Protein sequence | MNIPQLTALC LRYHGVLLDA SEEVVHVAVV DAPSHELLDA LHFATTKRIE ITCWTRQQME
GHASRTQQTL PVAVQEKHQP KAELLTRTLQ SALEQRASDI HIEPADNAYR IRLRIDGVLH
PLPDVSPDAG VALTARLKVL GNLDIAEHRL PQDGQFTVEL AGNAVSFRIA TLPCRGGEKV
VLRLLQQVSQ ALDVNTLGMQ PLQLADFAHA LQQPQGLVLV TGPTGSGKTV TLYSALQTLN
TADINICSVE DPVEIPIAGL NQTQIHPRAG LTFQGVLRAL LRQDPDVIMI GEIRDGETAE
IAIKAAQTGH LVLSTLHTNS TCETLVRLQQ MGVARWMLSS ALTLVIAQRL VRKLCPHCRR
QQGEPIHIPD NVWPSPLPHW QAPGCVHCYH GFYGRTALFE VLPITPVIRQ LISANTDVES
LETHARQAGM RTLFENGCLA VEQGLTTFEE LIRVLGMPHG E
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