| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0062 |
|---|
| Symbol | |
|---|
| ID | 5592464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 61558 |
|---|
| End bp | 62217 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640919250 |
|---|
| Product | 23S rRNA/tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_001456845 |
|---|
| Protein GI | 157159527 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000000000519589 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATGG AAAACTACAA TCCACCGCAG GAACCCTGGT TGGTTATCCT GTATCAGGAT
GACCATATTA TGGTGGTCAA CAAGCCGAGC GGTTTGTTGT CGGTGCCGGG TCGTCTGGAA
GAGCACAAAG ACAGCGTGAT GACGCGCATT CAGCGTGATT ATCCGCAGGC AGAATCGGTG
CATCGTCTGG ATATGGCTAC CAGCGGCGTG ATTGTAGTGG CGCTGACCAA AGCCGCGGAG
CGGGAGTTAA AACGCCAGTT CCGCGAGCGC GAGCCGAAAA AGCAGTATGT GGCCCGCGTC
TGGGGGCATC CATCCCCCGC AGAAGGTCTG GTGGATCTGC CTCTGATTTG CGACTGGCCA
AACCGCCCGA AACAGAAAGT CTGTTACGAA ACGGGTAAAC CTGCGCAGAC GGAATATGAA
GTGGTGGAGT ATGCGGCGGA TAACACGGCA AGAGTGGTGT TAAAACCGAT TACCGGGCGT
TCGCATCAAT TGCGTGTGCA TATGCTGGCG CTGGGGCATC CGATTCTCGG CGATCGTTTT
TATGCATCAC CAGAAGCGAG AGCGATGGCA CCGCGTTTGT TGCTACATGC AGAGATGTTG
ACGATTACCC ATCCGGCGTA TGGCAATAGT ATGACGTTTA AAGCGCCAGC GGATTTTTAA
|
|---|
| Protein sequence | MGMENYNPPQ EPWLVILYQD DHIMVVNKPS GLLSVPGRLE EHKDSVMTRI QRDYPQAESV
HRLDMATSGV IVVALTKAAE RELKRQFRER EPKKQYVARV WGHPSPAEGL VDLPLICDWP
NRPKQKVCYE TGKPAQTEYE VVEYAADNTA RVVLKPITGR SHQLRVHMLA LGHPILGDRF
YASPEARAMA PRLLLHAEML TITHPAYGNS MTFKAPADF
|
|---|
| |