| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0036 |
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| Symbol | carB |
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| ID | 5593831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 34076 |
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| End bp | 37297 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640919224 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001456819 |
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| Protein GI | 157159501 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG0439] Biotin carboxylase
[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT AAAAAGTATC CTGATTCTGG GTGCGGGCCC GATTGTTATC
GGTCAGGCGT GTGAGTTTGA CTACTCTGGC GCGCAAGCAT GTAAAGCCCT GCGCGAAGAG
GGTTACCGCG TCATTCTGGT GAACTCCAAC CCGGCGACCA TCATGACCGA CCCGGAAATG
GCCGATGCGA CCTACATCGA GCCGATTCAC TGGGAAGTAG TACGCAAGAT TATTGAAAAA
GAGCGCCCGG ACGCGGTGCT GCCAACGATG GGCGGTCAGA CGGCGCTGAA CTGCGCGCTG
GAGCTGGAGC GTCAGGGCGT GTTGGAAGAG TTCGGCGTGA CTATGATTGG TGCGACCGCC
GATGCGATTG ATAAAGCAGA AGACCGCCGT CGTTTCGACG TAGCGATGAA GAAAATTGGT
CTGGAAACCG CGCGTTCCGG TATCGCACAC ACGATGGAAG AAGCGCTGGC GGTTGCCGCT
GACGTGGGCT TCCCGTGCAT TATTCGCCCA TCCTTTACCA TGGGCGGTAG CGGCGGCGGT
ATCGCTTATA ACCGCGAAGA GTTTGAAGAA ATTTGCGCCC GCGGTCTGGA TCTCTCCCCA
ACCAAAGAGC TGCTGATTGA TGAGTCGCTG ATCGGCTGGA AAGAGTACGA GATGGAAGTG
GTGCGTGATA AAAACGACAA CTGCATCATC GTCTGCTCTA TCGAAAACTT TGATGCGATG
GGCATCCATA CCGGTGACTC CATCACTGTC GCGCCAGCCC AAACGCTGAC CGACAAAGAA
TATCAAATCA TGCGTAACGC CTCGATGGCG GTGCTGCGTG AAATCGGCGT TGAAACCGGT
GGTTCCAATG TCCAGTTTGC GGTGAACCCG AAAAACGGTC GCCTGATTGT TATCGAAATG
AACCCACGCG TGTCCCGTTC TTCGGCGCTG GCGTCGAAAG CGACCGGTTT CCCGATTGCT
AAAGTGGCGG CGAAACTGGC GGTGGGTTAC ACCCTCGACG AACTGATGAA CGACATCACT
GGCGGACGTA CTCCGGCCTC CTTCGAGCCG TCCATCGACT ATGTGGTTAC TAAAATTCCT
CGCTTCAACT TCGAAAAATT CGCTGGTGCT AACGACCGTC TGACCACTCA GATGAAATCG
GTTGGCGAAG TGATGGCGAT TGGTCGCACG CAGCAGGAAT CCCTGCAAAA AGCGCTGCGC
GGCCTGGAAG TCGGTGCGAC TGGATTCGAC CCGAAAGTGA GCCTCGATGA CCCGGAAGCG
TTAACCAAAA TCCGTCGCGA ACTGAAAGAT GCTGGCGCAG AGCGTATCTG GTACATCGCC
GATGCCTTCC GTGCGGGCCT GTCTGTGGAC GGCGTGTTCA ACCTGACCAA TATTGACCGC
TGGTTCCTGG TACAGATTGA AGAACTGGTG CGTCTGGAAG AGAAAGTAGC GGAAGTGGGC
ATCACTGGCC TGAACGCTGA ATTCCTGCGC CAGCTGAAAC GCAAAGGCTT TGCCGATGCG
CGTCTGGCAA AACTGGCGGG CGTGCGCGAA GCGGAAATCC GCAAGCTGCG CGACCAGTAT
GACCTGCACC CGGTTTATAA GCGCGTGGAT ACCTGTGCGG CAGAGTTCGC CACCGACACC
GCTTACATGT ACTCCACTTA TGAAGAAGAG TGCGAAGCGA ATCCGTCTAC CGACCGTGAA
AAAATCATGG TTCTCGGCGG CGGCCCGAAC CGTATCGGTC AGGGTATCGA ATTCGACTAC
TGCTGTGTAC ACGCCTCGCT GGCGCTGCGC GAAGACGGTT ACGAAACCAT TATGGTTAAC
TGTAACCCGG AAACCGTCTC CACCGACTAC GACACTTCCG ATCGCCTCTA CTTCGAGCCG
GTAACTCTGG AAGATGTGCT AGAAATCGTG CGTATTGAGA AGCCGAAAGG CGTTATCGTT
CAGTACGGCG GTCAGACCCC GCTGAAACTG GCGCGCGCGC TGGAAGCTGC TGGCGTACCG
GTTATCGGCA CCAGCCCGGA TGCTATCGAC CGTGCAGAAG ACCGTGAACG CTTCCAGCAT
GCGGTTGAGC GTCTGAAACT GAAACAACCG GCGAACGCCA CCGTTACCGC TATTGAAATG
GCGGTAGAGA AGGCGAAAGA GATTGGCTAC CCGCTGGTGG TACGTCCGTC TTACGTTCTC
GGCGGTCGGG CGATGGAAAT CGTCTATGAC GAAGCTGACC TGCGTCGCTA CTTCCAGACG
GCGGTCAGCG TGTCTAACGA TGCGCCAGTG TTGCTGGATC ACTTCCTTGA TGACGCGGTA
GAAGTTGACG TGGATGCCAT CTGCGACGGC GAAATGGTGC TGATTGGCGG CATCATGGAG
CACATCGAGC AGGCGGGCGT GCACTCCGGT GACTCCGCAT GTTCTCTGCC AGCCTACACC
TTAAGTCAGG AAATTCAGGA TGTGATGCGC CAGCAGGTGC AGAAACTGGC CTTCGAATTG
CAGGTGCGCG GTCTGATGAA CGTGCAGTTT GCGGTGAAAA ACAACGAAGT CTACCTGATT
GAAGTTAACC CGCGTGCGGC GCGTACCGTT CCGTTCGTCT CCAAAGCCAC CGGCGTACCG
CTGGCAAAAG TGGCGGCGCG TGTGATGGCT GGCAAATCGC TGGCTGAGCA GGGCGTAACC
AAAGAAGTTA TCCCGCCGTA CTACTCGGTG AAAGAAGTGG TGCTGCCGTT CAATAAATTC
CCGGGTGTTG ACCCGCTGTT AGGGCCAGAA ATGCGCTCCA CCGGGGAAGT GATGGGCGTG
GGCCGCACCT TCGCTGAAGC GTTTGCCAAA GCGCAGCTGG GCAGCAACTC CACCATGAAG
AAACACGGTC GTGCGCTGCT TTCCGTGCGC GAAGGCGATA AAGAACGCGT GGTGGACCTG
GCGGCAAAAC TGCTGAAACA GGGCTTCGAG CTGGATGCGA CCCACGGCAC GGCGATTGTG
CTGGGCGAAG CGGGCATTAA TCCGCGTCTG GTGAACAAGG TGCATGAAGG CCGTCCGCAC
ATTCAGGACC GCATCAAGAA TGGCGAATAT ACCTACATCA TCAACACCAC TTCAGGCCGT
CGCGCGATTG AAGACTCCCG CGTGATCCGT CGCAGTGCGC TGCAATATAA AGTGCATTAT
GACACCACCC TGAACGGTGG TTTCGCTACC GCGATGGCGC TGAATGCCGA CGCGACCGAA
AAAGTAATTT CGGTGCAGGA AATGCACGCG CAGATCAAAT AA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIH WEVVRKIIEK ERPDAVLPTM GGQTALNCAL ELERQGVLEE FGVTMIGATA
DAIDKAEDRR RFDVAMKKIG LETARSGIAH TMEEALAVAA DVGFPCIIRP SFTMGGSGGG
IAYNREEFEE ICARGLDLSP TKELLIDESL IGWKEYEMEV VRDKNDNCII VCSIENFDAM
GIHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFAVNP KNGRLIVIEM
NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELMNDIT GGRTPASFEP SIDYVVTKIP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT QQESLQKALR GLEVGATGFD PKVSLDDPEA
LTKIRRELKD AGAERIWYIA DAFRAGLSVD GVFNLTNIDR WFLVQIEELV RLEEKVAEVG
ITGLNAEFLR QLKRKGFADA RLAKLAGVRE AEIRKLRDQY DLHPVYKRVD TCAAEFATDT
AYMYSTYEEE CEANPSTDRE KIMVLGGGPN RIGQGIEFDY CCVHASLALR EDGYETIMVN
CNPETVSTDY DTSDRLYFEP VTLEDVLEIV RIEKPKGVIV QYGGQTPLKL ARALEAAGVP
VIGTSPDAID RAEDRERFQH AVERLKLKQP ANATVTAIEM AVEKAKEIGY PLVVRPSYVL
GGRAMEIVYD EADLRRYFQT AVSVSNDAPV LLDHFLDDAV EVDVDAICDG EMVLIGGIME
HIEQAGVHSG DSACSLPAYT LSQEIQDVMR QQVQKLAFEL QVRGLMNVQF AVKNNEVYLI
EVNPRAARTV PFVSKATGVP LAKVAARVMA GKSLAEQGVT KEVIPPYYSV KEVVLPFNKF
PGVDPLLGPE MRSTGEVMGV GRTFAEAFAK AQLGSNSTMK KHGRALLSVR EGDKERVVDL
AAKLLKQGFE LDATHGTAIV LGEAGINPRL VNKVHEGRPH IQDRIKNGEY TYIINTTSGR
RAIEDSRVIR RSALQYKVHY DTTLNGGFAT AMALNADATE KVISVQEMHA QIK
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